RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 TRABDQ9H4I3 376 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 MYH3P11055 1940 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 CLDN3O15551 220 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 TMCC1O94876 653 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 CASP4P49662 377 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 USP17L2Q6R6M4 530 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 NME8Q8N427 588 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 WDR60Q8WVS4 1066 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 GATA6Q92908 595 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 DNAJC1Q96KC8 554 aaKnown RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 MIS12Q9H081 205 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 LNPEPQ9UIQ6 1025 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 COG5Q9UP83 839 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
TSKU-203ENST00000527881 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 COMMD3-BMI1R4GMX3 469 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 ZWINTO95229 277 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CETPP11597 493 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 MAGEA10P43363 369 aaPredicted RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 BPIFB4P59827 614 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 DSG1Q02413 1049 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 ECM1Q16610 540 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 Q4G0T1 1027 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CLNKQ7Z7G1 428 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 SYT2Q8N9I0 419 aaPredicted RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 ZCRB1Q8TBF4 217 aaKnown RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 PIGSQ96S52 555 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 PCDHA12Q9UN75 941 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CIB2O75838 187 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 GAS8O95995 478 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 FTLP02792 175 aaPredicted RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 PPATQ06203 517 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CAVIN4Q5BKX8 364 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 SLC13A5Q86YT5 568 aaPredicted RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 KBTBD2Q8IY47 623 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 ARHGAP24Q8N264 748 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 NDE1Q9NXR1 346 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 NINJ2Q9NZG7 142 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 ZNF232Q9UNY5 417 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 POTEB3A0JP26 581 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 POTECB2RU33 542 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CALUO43852 315 aaPredicted RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 AKAP3O75969 853 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 RPL13P26373 211 aaKnown RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 ANXA13P27216 316 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 EAPPQ56P03 285 aaPredicted RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 POTEBQ6S5H4 581 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 MARK2Q7KZI7 788 aaKnown RBP13.3□□□□□ -0.28
TSKU-203ENST00000527881 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 PHLDB2Q86SQ0 1253 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 PALB2Q86YC2 1186 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CEP70Q8NHQ1 597 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 SH3TC2Q8TF17 1288 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 COA7Q96BR5 231 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 SNF8Q96H20 258 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 BTBD6Q96KE9 485 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 VPS37BQ9H9H4 285 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 ARL8BQ9NVJ2 186 aa13.3□□□□□ -0.28
TSKU-203ENST00000527881 SIPA1L3O60292 1781 aaPredicted RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 ANKRD62A6NC57 917 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 SIGLEC16A6NMB1 481 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 GSC2O15499 205 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 EDF1O60869 148 aaKnown RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 CYP1A1P04798 512 aaPredicted RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 PIK3CAP42336 1068 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 CASP5P51878 434 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 SH3BGRP55822 239 aaPredicted RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 CHRNDQ07001 517 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 WDR72Q3MJ13 1102 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 GSTA5Q7RTV2 222 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 IWS1Q96ST2 819 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 TYW1Q9NV66 732 aaKnown RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 PCDHGA4Q9Y5G9 962 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 ECE2O60344 883 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 GCNT3O95395 438 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 EPHA7Q15375 998 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 DDB1Q16531 1140 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 GSTA3Q16772 222 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 C1QTNF12Q5T7M4 302 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 ISLR2Q6UXK2 745 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms