RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 EXOC3O60645 756 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 RPLP2P05387 115 aaKnown RBP20.41■□□□□ 0.86
SMPD1-203ENST00000527275 TSHZ1Q6ZSZ6 1077 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 CDR2LQ86X02 465 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-203ENST00000527275 RDH13Q8NBN7 331 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 EPHB6O15197 1021 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 TOM1L1O75674 476 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 ERLIN2O94905 339 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMPD1-203ENST00000527275 MYBPC2Q14324 1141 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
SMPD1-203ENST00000527275 ATF7IP2Q5U623 682 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 SLC39A5Q6ZMH5 540 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 ANKLE1Q8NAG6 615 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 NEK11Q8NG66 645 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 SAAL1Q96ER3 474 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 TCHPQ9BT92 498 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 DNAI1Q9UI46 699 aa20.41■□□□□ 0.86
SMPD1-203ENST00000527275 EPN1Q9Y6I3 576 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-203ENST00000527275 SLC16A3O15427 465 aaKnown RBP20.4■□□□□ 0.86
SMPD1-203ENST00000527275 CLDN3O15551 220 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 TSPAN1O60635 241 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 PQBP1O60828 265 aaKnown RBP20.4■□□□□ 0.86
SMPD1-203ENST00000527275 ARF4P18085 180 aaPredicted RBP20.4■□□□□ 0.86
SMPD1-203ENST00000527275 GARTP22102 1010 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 KCNH2Q12809 1159 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 TMEM132AQ24JP5 1023 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 XXYLT1Q8NBI6 393 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 ACRBPQ8NEB7 543 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 PAWRQ96IZ0 340 aaKnown RBP20.4■□□□□ 0.86
SMPD1-203ENST00000527275 METTL14Q9HCE5 456 aaKnown RBP20.4■□□□□ 0.86
SMPD1-203ENST00000527275 PTPRHQ9HD43 1115 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 FRMD4BQ9Y2L6 1034 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 TRPV2Q9Y5S1 764 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 CNTNAP2Q9UHC6 1331 aa20.4■□□□□ 0.86
SMPD1-203ENST00000527275 GOLGA8IPA6NC78 632 aa20.39■□□□□ 0.86
SMPD1-203ENST00000527275 GOLGA8JA6NMD2 632 aa20.39■□□□□ 0.86
SMPD1-203ENST00000527275 EPB41P11171 864 aaKnown RBP20.39■□□□□ 0.86
SMPD1-203ENST00000527275 SLFN12LQ6IEE8 588 aa20.39■□□□□ 0.86
SMPD1-203ENST00000527275 CATSPER4Q7RTX7 472 aa20.39■□□□□ 0.86
SMPD1-203ENST00000527275 CPB2Q96IY4 423 aa20.39■□□□□ 0.86
SMPD1-203ENST00000527275 A0A0B4J269 797 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 ABLIM1O14639 778 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 NDUFA10O95299 355 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 CD4P01730 458 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 PSMC2P35998 433 aaKnown RBP20.39■□□□□ 0.85
SMPD1-203ENST00000527275 MATR3P43243 847 aaKnown RBP eCLIP20.39■□□□□ 0.85
SMPD1-203ENST00000527275 PPP2R3AQ06190 1150 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 MGAT3Q09327 533 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 ZNF618Q5T7W0 954 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 ZBTB33Q86T24 672 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 EDEM3Q9BZQ6 932 aa20.39■□□□□ 0.85
SMPD1-203ENST00000527275 CKBP12277 381 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 PROZP22891 400 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 EEF1DP3Q658K8 133 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 MSTO1Q9BUK6 570 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 LZTFL1Q9NQ48 299 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 AGO2Q9UKV8 859 aaKnown RBP20.38■□□□□ 0.85
SMPD1-203ENST00000527275 TNFSF13BQ9Y275 285 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 NOC2LQ9Y3T9 749 aaKnown RBP20.38■□□□□ 0.85
SMPD1-203ENST00000527275 A0A1B0GUA9 196 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 HARSP12081 509 aaKnown RBP20.38■□□□□ 0.85
SMPD1-203ENST00000527275 HOXA11P31270 313 aaPredicted RBP20.38■□□□□ 0.85
SMPD1-203ENST00000527275 HNRNPH3P31942 346 aaKnown RBP20.38■□□□□ 0.85
SMPD1-203ENST00000527275 GNG11P61952 73 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 MPZL3Q6UWV2 235 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 CBWD2Q8IUF1 395 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 FAM186BQ8IYM0 893 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 BORCS6Q96GS4 357 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 FBXL18Q96ME1 805 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 CRACR2AQ9BSW2 395 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 MKNK1Q9BUB5 465 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 PLAGL2Q9UPG8 496 aa20.38■□□□□ 0.85
SMPD1-203ENST00000527275 MROH7Q68CQ1 1323 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 A0A0U1RQJ8 604 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 DYNC1I1O14576 645 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 CDK17Q00537 523 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMPD1-203ENST00000527275 SNRNP35Q16560 246 aaKnown RBP20.37■□□□□ 0.85
SMPD1-203ENST00000527275 ZNF568Q3ZCX4 644 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 ANKRD33Q7Z3H0 272 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 ATRIPQ8WXE1 791 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 FAM213AQ9BRX8 229 aa20.37■□□□□ 0.85
SMPD1-203ENST00000527275 AFPP02771 609 aaKnown RBP20.36■□□□□ 0.85
SMPD1-203ENST00000527275 ACOT2P49753 483 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 MCL1Q07820 350 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 TRIM60Q495X7 471 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 SEZ6Q53EL9 994 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 RRAGAQ7L523 313 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 CACNA2D4Q7Z3S7 1137 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 FAM228AQ86W67 206 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 GPD1LQ8N335 351 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 BAP1Q92560 729 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 LSM14BQ9BX40 385 aaKnown RBP20.36■□□□□ 0.85
SMPD1-203ENST00000527275 PDZD7Q9H5P4 517 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 C11orf49Q9H6J7 331 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 NHEJ1Q9H9Q4 299 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-203ENST00000527275 CAND2O75155 1236 aa20.36■□□□□ 0.85
SMPD1-203ENST00000527275 RPS6KA5O75582 802 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms