RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 TAS1R1Q7RTX1 841 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 BRAPQ7Z569 592 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 AK8Q96MA6 479 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 MMTAG2Q9BU76 263 aaKnown RBP12.8□□□□□ -0.36
HIF3A-209ENST00000525854 RUSC1Q9BVN2 902 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 TMEM134Q9H6X4 195 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 KMT5AQ9NQR1 393 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 CHST7Q9NS84 486 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 SNTG2Q9NY99 539 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
HIF3A-209ENST00000525854 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.36
HIF3A-209ENST00000525854 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 F8W810 466 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 TEX28O15482 410 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 GLUD1P00367 558 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 SP100P23497 879 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-209ENST00000525854 GUCY2CP25092 1073 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 ELAVL2Q12926 359 aaKnown RBP12.79□□□□□ -0.36
HIF3A-209ENST00000525854 PTPN21Q16825 1174 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 NT5DC1Q5TFE4 455 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 EEF1DP3Q658K8 133 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 RINT1Q6NUQ1 792 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 C15orf39Q6ZRI6 1047 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 HFE2Q6ZVN8 426 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 C1orf186Q6ZWK4 172 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 GPR149Q86SP6 731 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 TDRD5Q8NAT2 981 aaKnown RBP12.79□□□□□ -0.36
HIF3A-209ENST00000525854 CMASQ8NFW8 434 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-209ENST00000525854 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
HIF3A-209ENST00000525854 GPR62Q9BZJ7 368 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 CDH22Q9UJ99 828 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 USTQ9Y2C2 406 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 USP20Q9Y2K6 914 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
HIF3A-209ENST00000525854 TMEM221A6NGB7 291 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 M0R296 226 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 PTGESO14684 152 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 EDN1P05305 212 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 PDCP20941 246 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 SMTNP53814 917 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 YARSP54577 528 aaKnown RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 SIGLEC14Q08ET2 396 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 BMP8AQ7Z5Y6 402 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 ZDHHC14Q8IZN3 488 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 DAW1Q8N136 415 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 HDAC7Q8WUI4 952 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 RIN2Q8WYP3 895 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 ACSF2Q96CM8 615 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 NTPCRQ9BSD7 190 aaKnown RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 MAN1C1Q9NR34 630 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-209ENST00000525854 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 ARHGAP28Q9P2N2 729 aa12.78□□□□□ -0.36
HIF3A-209ENST00000525854 CASTOR2A6NHX0 329 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 C2CD4DB7Z1M9 353 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 PLA2G4BP0C869 781 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 UBA7P41226 1012 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 GRM5P41594 1212 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 STRN3Q13033 797 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 MAPK7Q13164 816 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 ZNF568Q3ZCX4 644 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 KANK3Q6NY19 840 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 PDXDC1Q6P996 788 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 CCDC149Q6ZUS6 474 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 OTOP3Q7RTS5 596 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 UBALD2Q8IYN6 164 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 PBXIP1Q96AQ6 731 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 CALML4Q96GE6 196 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 UROC1Q96N76 676 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
HIF3A-209ENST00000525854 TCHPQ9BT92 498 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 TTPALQ9BTX7 342 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 RHOBTB2Q9BYZ6 727 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 PLEKHA4Q9H4M7 779 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 PTPRHQ9HD43 1115 aa12.77□□□□□ -0.37
HIF3A-209ENST00000525854 TECTAO75443 2155 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 H0YCG3 227 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 SLC16A4O15374 487 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 KIF4AO95239 1232 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 MCF2P10911 925 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 PLS3P13797 630 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 SCP2P22307 547 aa12.76□□□□□ -0.37
HIF3A-209ENST00000525854 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms