RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CDT1Q9H211 546 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 SPTBN5Q9NRC6 3674 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 FAM50BQ9Y247 325 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 CUL9Q8IWT3 2517 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 CASTOR2A6NHX0 329 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 FAM13AO94988 1023 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 MAPTP10636 758 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 DDIT3P35638 169 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 STRN3Q13033 797 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 COASYQ13057 564 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 KCNC3Q14003 757 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 PTPN14Q15678 1187 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 SMAD2Q15796 467 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZNF568Q3ZCX4 644 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 GLRA4Q5JXX5 417 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 RRAGBQ5VZM2 374 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 ANKRD54Q6NXT1 300 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 GJD3Q8N144 294 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 MYCT1Q8N699 235 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 KRI1Q8N9T8 703 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 LARP4BQ92615 738 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 KHSRPQ92945 711 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 B3GALT6Q96L58 329 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 PTPRHQ9HD43 1115 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 USP15Q9Y4E8 981 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 HCFC2Q9Y5Z7 792 aa14.1□□□□□ -0.15
TRAPPC4-205ENST00000525079 MYH15Q9Y2K3 1946 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 SOD2P04179 222 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 THP07101 528 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZSCAN22P10073 491 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 EPCAMP16422 314 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 TUSC3Q13454 348 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 PKP1Q13835 747 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 SEZ6Q53EL9 994 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 KANK3Q6NY19 840 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 SYCE2Q6PIF2 218 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 TMEM184AQ6ZMB5 413 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 DYMQ7RTS9 669 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 HAUS6Q7Z4H7 955 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 LINC00301Q8NCQ3 95 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 SMRP1Q8NCR6 262 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 HASPINQ8TF76 798 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZNF396Q96N95 335 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 KLHL5Q96PQ7 755 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 HERC2P3Q9BVR0 1158 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 GPR62Q9BZJ7 368 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 MRPL17Q9NRX2 175 aaKnown RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 LARSQ9P2J5 1176 aaKnown RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 ANKFY1Q9P2R3 1169 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 DAXXQ9UER7 740 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 KCNG1Q9UIX4 513 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 CDH22Q9UJ99 828 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 ODF2LQ9ULJ1 636 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZMYM2Q9UBW7 1377 aa14.09□□□□□ -0.15
TRAPPC4-205ENST00000525079 VCANP13611 3396 aa14.08□□□□□ -0.15
TRAPPC4-205ENST00000525079 A0A087X0B3 334 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 FSD2A1L4K1 749 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 ABLIM1O14639 778 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 LILRB3O75022 631 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 TBCAO75347 108 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 TADA2AO75478 443 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 CNPP09543 421 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 SRGAP2BP0DMP2 458 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 MCF2P10911 925 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 PROZP22891 400 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 IGFBP6P24592 240 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 KLRC2P26717 231 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 TXLNAP40222 546 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 GRM5P41594 1212 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 MATR3P43243 847 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 NCKAP1LP55160 1127 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 ZP2Q05996 745 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 HSP90AA2PQ14568 343 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 NAB2Q15742 525 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 FUT10Q6P4F1 479 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 MPZL3Q6UWV2 235 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 SLC22A17Q8WUG5 538 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 CASP10Q92851 521 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 BICD1Q96G01 975 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 CCDC94Q9BW85 323 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 S1PR5Q9H228 398 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 ADAM28Q9UKQ2 775 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 IRAK3Q9Y616 596 aa14.08□□□□□ -0.16
TRAPPC4-205ENST00000525079 MYMKA6NI61 221 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 K7ENM7 598 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 SPTLC2O15270 562 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 TRAK2O60296 914 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 KIF4AO95239 1232 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 EFEMP2O95967 443 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 F13A1P00488 732 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 URODP06132 367 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 MYBP10242 640 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 NMT1P30419 496 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 GLUD2P49448 558 aa14.07□□□□□ -0.16
TRAPPC4-205ENST00000525079 ZNF131P52739 623 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms