RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SECISBP2LQ93073 1101 aaKnown RBP8.45□□□□□ -1.06
NEDD8-203ENST00000524927 SGSM3Q96HU1 749 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 COX4I2Q96KJ9 171 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 KRTAP4-9Q9BYQ8 210 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 HOXC10Q9NYD6 342 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 CLEC1BQ9P126 229 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 KCNH3Q9ULD8 1083 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 HECTD1Q9ULT8 2610 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 FANCMQ8IYD8 2048 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 ABHD14A-ACY1A0A1B0GW23 586 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 PI15O43692 258 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 FAM153BP0C7A2 387 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 C1QTNF9P0C862 333 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 CYP2C9P11712 490 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 VCAM1P19320 739 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 JAG1P78504 1218 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 SQSTM1Q13501 440 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 CCDC57Q2TAC2 916 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 DUSP27Q5VZP5 1158 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 MB21D1Q8N884 522 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 ZSWIM2Q8NEG5 633 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 NETO1Q8TDF5 533 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 PRDM14Q9GZV8 571 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 TMEM260Q9NX78 707 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 APEX2Q9UBZ4 518 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 ZHX1Q9UKY1 873 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-203ENST00000524927 ZBTB21Q9ULJ3 1066 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 MROH5Q6ZUA9 1318 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 TET1Q8NFU7 2136 aa8.44□□□□□ -1.06
NEDD8-203ENST00000524927 LOC400499M0QZD8 3231 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 A0A1W2PQU0 124 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 PI4KAP2A4QPH2 592 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 LINC01565O15544 149 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 ADCY6O43306 1168 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 KINO60870 393 aaKnown RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 SNAI1O95863 264 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 PGK2P07205 417 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 FOSL1P15407 271 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 NCLP19338 710 aaKnown RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 HTRA4P83105 476 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 FOXO4P98177 505 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 CYP27A1Q02318 531 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 HSP90AA2PQ14568 343 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 COG2Q14746 738 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 MAMDC4Q6UXC1 1216 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 PI4KAP1Q8N8J0 262 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 BVESQ8NE79 360 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 FLCNQ8NFG4 579 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 SUSD6Q92537 303 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 BRF1Q92994 677 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 MMP19Q99542 508 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 CDC6Q99741 560 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 SLKQ9H2G2 1235 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 TRMT13Q9NUP7 481 aaKnown RBP8.43□□□□□ -1.06
NEDD8-203ENST00000524927 AKT3Q9Y243 479 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 SPTA1P02549 2419 aa8.43□□□□□ -1.06
NEDD8-203ENST00000524927 FAM170BA6NMN3 283 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 RBAK-RBAKDNI3L0D1 243 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 SHOXO15266 292 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 ZEB2O60315 1214 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 MAP4K4O95819 1239 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-203ENST00000524927 SLC25A27O95847 323 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 ITGAVP06756 1048 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 TGM1P22735 817 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 KIR3DL1P43629 444 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 BEX3Q00994 111 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 LMOD3Q0VAK6 560 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 BFSP2Q13515 415 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 SNW1Q13573 536 aaKnown RBP8.42□□□□□ -1.06
NEDD8-203ENST00000524927 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 PPP2R5DQ14738 602 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 N4BP2L1Q5TBK1 243 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-203ENST00000524927 CNKSR3Q6P9H4 555 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.42□□□□□ -1.06
NEDD8-203ENST00000524927 GATA6Q92908 595 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 PPP2R3CQ969Q6 453 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 FEZ1Q99689 392 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 LGR4Q9BXB1 951 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 KIAA1683Q9H0B3 1180 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 NOL6Q9H6R4 1146 aaKnown RBP8.42□□□□□ -1.06
NEDD8-203ENST00000524927 GFOD1Q9NXC2 390 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 PI4KBQ9UBF8 816 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 MAPK8IP3Q9UPT6 1336 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 TANC1Q9C0D5 1861 aa8.42□□□□□ -1.06
NEDD8-203ENST00000524927 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
NEDD8-203ENST00000524927 TRAV20A0A0B4J274 112 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 SP9P0CG40 484 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 ZNF445P59923 1031 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 LONRF2Q1L5Z9 754 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 PLEKHG4Q58EX7 1191 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 POMZP3Q6PJE2 187 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 ZNF765Q7L2R6 523 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 FAM214BQ7L5A3 538 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 TMEFF1Q8IYR6 380 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 EFHBQ8N7U6 833 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 HEXIM2Q96MH2 286 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms