RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ANKEF1Q9NU02 776 aa8.92□□□□□ -0.98
CHD7-202ENST00000524602 ZNF70Q9UC06 446 aaPredicted RBP8.92□□□□□ -0.98
CHD7-202ENST00000524602 CCPG1Q9ULG6 757 aa8.92□□□□□ -0.98
CHD7-202ENST00000524602 CEP83Q9Y592 693 aa8.92□□□□□ -0.98
CHD7-202ENST00000524602 SPOPO43791 374 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 RASSF9O75901 435 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 SGPL1O95470 568 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 YWHABP31946 246 aaKnown RBP8.91□□□□□ -0.98
CHD7-202ENST00000524602 SFNP31947 248 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 CAP2P40123 477 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 PDE6CP51160 858 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 JAK3P52333 1124 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 ITIH4Q14624 930 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 MESDQ14696 234 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 ANKRD20A8PQ5CZ79 823 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 CCDC105Q8IYK2 499 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 PCDHB18PQ96TA0 734 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 NUP85Q9BW27 656 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 WHRNQ9P202 907 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 ZBTB12Q9Y330 459 aaPredicted RBP8.91□□□□□ -0.98
CHD7-202ENST00000524602 CLRN2A0PK11 232 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 TCP10L2B9ZVM9 353 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 RIPK2O43353 540 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 CTNND1O60716 968 aaKnown RBP8.91□□□□□ -0.98
CHD7-202ENST00000524602 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
CHD7-202ENST00000524602 SHBGP04278 402 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 COPB2P35606 906 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 FMO1Q01740 532 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 SLC29A2Q14542 456 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 SNRNP35Q16560 246 aaKnown RBP8.91□□□□□ -0.98
CHD7-202ENST00000524602 QPCTQ16769 361 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 SPDYE2Q495Y8 402 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 TTC27Q6P3X3 843 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 RDM1Q8NG50 284 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 ZNF317Q96PQ6 595 aaPredicted RBP8.91□□□□□ -0.98
CHD7-202ENST00000524602 C17orf75Q9HAS0 396 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 CNTNAP1P78357 1384 aa8.91□□□□□ -0.98
CHD7-202ENST00000524602 ZC3H11AO75152 810 aaKnown RBP eCLIP8.9□□□□□ -0.98
CHD7-202ENST00000524602 ECEL1O95672 775 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 MMEP08473 750 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 PYGMP11217 842 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CYP11B1P15538 503 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CHN1P15882 459 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ATP5DP30049 168 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ABCD1P33897 745 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 PSMC5P62195 406 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CALCOCO2Q13137 446 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 MTMR1Q13613 665 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 SIX1Q15475 284 aaPredicted RBP8.9□□□□□ -0.98
CHD7-202ENST00000524602 FAM83AQ86UY5 434 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 MAP4K3Q8IVH8 894 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CCDC197Q8NCU1 140 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ATXN2LQ8WWM7 1075 aaKnown RBP8.9□□□□□ -0.98
CHD7-202ENST00000524602 TRIM11Q96F44 468 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 KREMEN1Q96MU8 473 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 NT5C1BQ96P26 610 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 NSRP1Q9H0G5 558 aaKnown RBP8.9□□□□□ -0.98
CHD7-202ENST00000524602 CXorf56Q9H5V9 222 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ZNFX1Q9P2E3 1918 aaKnown RBP8.9□□□□□ -0.98
CHD7-202ENST00000524602 TMEM110-MUSTN1A8MSY1 372 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 DDX39AO00148 427 aaKnown RBP8.9□□□□□ -0.98
CHD7-202ENST00000524602 FSCN2O14926 492 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ASNSP08243 561 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 MYBL1P10243 752 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 MARCKSL1P49006 195 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CAV1Q03135 178 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 DLGAP5Q15398 846 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ACAD10Q6JQN1 1059 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 PPM1KQ8N3J5 372 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 PLEKHO2Q8TD55 490 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CCT6BQ92526 530 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 ZNF653Q96CK0 615 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 CCDC114Q96M63 670 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 GMLQ99445 158 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 TACO1Q9BSH4 297 aaKnown RBP8.9□□□□□ -0.98
CHD7-202ENST00000524602 OSBPL7Q9BZF2 842 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 KLC4Q9NSK0 619 aa8.9□□□□□ -0.98
CHD7-202ENST00000524602 RASGRF2O14827 1237 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 CYP26A1O43174 497 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 DNAJC8O75937 253 aaPredicted RBP8.9□□□□□ -0.99
CHD7-202ENST00000524602 GSTA1P08263 222 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 SLC1A1P43005 524 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 KRT76Q01546 638 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 MAP3K10Q02779 954 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 ZNF568Q3ZCX4 644 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 AADACL2Q6P093 401 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 RNF207Q6ZRF8 634 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 MIGA2Q7L4E1 593 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 SLC47A2Q86VL8 602 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 ZNF677Q86XU0 584 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 FBXL13Q8NEE6 735 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 HELQQ8TDG4 1101 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 PARD3BQ8TEW8 1205 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 SPIRE2Q8WWL2 714 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 CLEC4DQ8WXI8 215 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 LPAR1Q92633 364 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 MFSD14AQ96MC6 490 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 FBXL18Q96ME1 805 aa8.9□□□□□ -0.99
CHD7-202ENST00000524602 ADAM7Q9H2U9 754 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms