RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 ZFP69BQ9UJL9 534 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 ANAPC5Q9UJX4 755 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 MINPP1Q9UNW1 487 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 TRIM33Q9UPN9 1127 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CHKBQ9Y259 395 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 SPATA31A1Q5TZJ5 1347 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 KAT6BQ8WYB5 2073 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 NHSQ6T4R5 1651 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CYP3A7-CYP3A51PA0A087WV96 503 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 POTEB3A0JP26 581 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 TJP3O95049 919 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 ASMTLO95671 621 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 PENKP01210 267 aaPredicted RBP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 LDHBP07195 334 aaKnown RBP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 KCNA3P22001 575 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CYP3A7P24462 503 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 RPA1P27694 616 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 COPB2P35606 906 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 RFC5P40937 340 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 POLE2P56282 527 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CTTNQ14247 550 aaKnown RBP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 SNX30Q5VWJ9 437 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 POTEBQ6S5H4 581 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CLEC4GQ6UXB4 293 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 LRRC74BQ6ZQY2 392 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 SFR1Q86XK3 245 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 SRRM1Q8IYB3 904 aaKnown RBP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 STKLD1Q8NE28 680 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 ATL2Q8NHH9 583 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 PIP4K2CQ8TBX8 421 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CD101Q93033 1021 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 OPTNQ96CV9 577 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 ARHGEF26Q96DR7 871 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 DYNLL2Q96FJ2 89 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 FAM81BQ96LP2 452 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 BTBD10Q9BSF8 475 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 FGFBP2Q9BYJ0 223 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 VAT1LQ9HCJ6 419 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 STX18Q9P2W9 335 aaKnown RBP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 TMCO1Q9UM00 188 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 NAALADL1Q9UQQ1 740 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 COMMD3-BMI1R4GMX3 469 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 PLIN4Q96Q06 1357 aa8.03□□□□□ -1.12
HMBOX1-211ENST00000524238 ASTN1O14525 1302 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 IGSF9BQ9UPX0 1349 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 GSTTP1A0A1W2PQM5 241 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 F8W8V4 182 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 ATP9AO75110 1047 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 GCNT3O95395 438 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 FTLP02792 175 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 COMTP21964 271 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 EPHB2P29323 1055 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 PRDX5P30044 214 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 CDK8P49336 464 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 CACNA2D1P54289 1103 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 MYL7Q01449 175 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 AP3B2Q13367 1082 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 ZC3H12AQ5D1E8 599 aaKnown RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 GPATCH4Q5T3I0 446 aaKnown RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 HHATQ5VTY9 493 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 TBC1D9BQ66K14 1250 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 USP17L2Q6R6M4 530 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 PHLDB2Q86SQ0 1253 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 LCA5Q86VQ0 697 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 SLF2Q8IX21 1173 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 NME8Q8N427 588 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 KLHL23Q8NBE8 558 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 C10orf82Q8WW14 230 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 SCG3Q8WXD2 468 aaKnown RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 MCUR1Q96AQ8 359 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 BORCS6Q96GS4 357 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 MBOAT7Q96N66 472 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 ZNF184Q99676 751 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 EPAS1Q99814 870 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 PHACTR1Q9C0D0 580 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 INTS2Q9H0H0 1204 aaKnown RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 DENND2DQ9H6A0 471 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 SUDS3Q9H7L9 328 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 DNAJC18Q9H819 358 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 NINJ2Q9NZG7 142 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 PTPN22Q9Y2R2 807 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 PCDHB13Q9Y5F0 798 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 MYO3BQ8WXR4 1341 aa8.02□□□□□ -1.13
HMBOX1-211ENST00000524238 SIGLEC16A6NMB1 481 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 ATP2A1O14983 1001 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 ZBED4O75132 1171 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 HAUS5O94927 633 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 CAMTA2O94983 1202 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 PSMG1O95456 288 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 ATP5BP06576 529 aaKnown RBP8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 SNHG28P0DPA3 235 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 PYGMP11217 842 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 IMPDH2P12268 514 aa8.01□□□□□ -1.13
HMBOX1-211ENST00000524238 CETN2P41208 172 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms