RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 DDX3XO00571 662 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 CES2O00748 559 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 STBD1O95210 358 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 KIF4AO95239 1232 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 TFRCP02786 760 aaKnown RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 PGK2P07205 417 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 MARK3P27448 753 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 SLC26A2P50443 739 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 GALCP54803 685 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 VSNL1P62760 191 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 SP2Q02086 613 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 GABPB1Q06547 395 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 MXD4Q14582 209 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 GLE1Q53GS7 698 aaKnown RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 MEI1Q5TIA1 1274 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 IER5Q5VY09 327 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 FBXO46Q6PJ61 603 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 ZNF572Q7Z3I7 529 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 FBXO16Q8IX29 292 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 TPCN2Q8NHX9 752 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 LNX1Q8TBB1 728 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 ASAP3Q8TDY4 903 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 COG1Q8WTW3 980 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 SCFD2Q8WU76 684 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 NAP1L3Q99457 506 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-222ENST00000524006 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 TLR10Q9BXR5 811 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 SMARCAD1Q9H4L7 1026 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 ZNF446Q9NWS9 450 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 CTTNBP2NLQ9P2B4 639 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 ADGRA3Q8IWK6 1321 aa11.6□□□□□ -0.55
SPIDR-222ENST00000524006 GSTTP1A0A1W2PQM5 241 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 UNCXA6NJT0 531 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 PGRMC1O00264 195 aaKnown RBP11.59□□□□□ -0.55
SPIDR-222ENST00000524006 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-222ENST00000524006 CEP104O60308 925 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 FKTNO75072 461 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 CNMDO75829 334 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 ZRANB2O95218 330 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPIDR-222ENST00000524006 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
SPIDR-222ENST00000524006 GLRA2P23416 452 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 GPC3P51654 580 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 GTF2A2P52657 109 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 BPIFB4P59827 614 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 PSMD6Q15008 389 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 SURF1Q15526 300 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 LY6KQ17RY6 165 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
SPIDR-222ENST00000524006 TAF3Q5VWG9 929 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 CREG2Q8IUH2 290 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 IFT20Q8IY31 132 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 UBL4BQ8N7F7 174 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 SPATA4Q8NEY3 305 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 ATP8B4Q8TF62 1192 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 TRIM11Q96F44 468 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 RUFY1Q96T51 708 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 TMEM134Q9H6X4 195 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 SUGCTQ9HAC7 445 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.558e-7■■■■■ 253.8
SPIDR-222ENST00000524006 PDLIM7Q9NR12 457 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 RAB20Q9NX57 234 aa11.59□□□□□ -0.55
SPIDR-222ENST00000524006 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 CCL15-CCL14A0A0B4J2E2 113 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 TMEM110-MUSTN1A8MSY1 372 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 ADCY3O60266 1144 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PEX10O60683 326 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 RTN2O75298 545 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 MAFO75444 373 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PIGRP01833 764 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PRKCBP05771 671 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 ADSSP30520 456 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 ARL2P36404 184 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 AP3M2P53677 418 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PAK2Q13177 524 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 MAPK6Q16659 721 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 CCL15Q16663 113 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PPP1R2P3Q6NXS1 205 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PLPPR4Q7Z2D5 763 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 SCLT1Q96NL6 688 aa11.58□□□□□ -0.56
SPIDR-222ENST00000524006 PARK7Q99497 189 aaKnown RBP11.58□□□□□ -0.56
SPIDR-222ENST00000524006 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms