RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 MB21D1Q8N884 522 aa5.68□□□□□ -1.5
NSMCE2-211ENST00000523549 PPP1R14CQ8TAE6 165 aa5.68□□□□□ -1.5
NSMCE2-211ENST00000523549 NTN5Q8WTR8 489 aaPredicted RBP5.68□□□□□ -1.5
NSMCE2-211ENST00000523549 TUBGCP5Q96RT8 1024 aa5.68□□□□□ -1.5
NSMCE2-211ENST00000523549 SOX7Q9BT81 388 aa5.68□□□□□ -1.5
NSMCE2-211ENST00000523549 TRPM2O94759 1503 aa5.68□□□□□ -1.5
NSMCE2-211ENST00000523549 ABCC5O15440 1437 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 CCDC142Q17RM4 750 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 C2orf27AQ580R0 203 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 METTL24Q5JXM2 366 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 LY6G5CQ5SRR4 150 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 PRAMEF9Q5VWM5 478 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 LILRB2Q8N423 598 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 KIAA1958Q8N8K9 716 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 PROKR1Q8TCW9 393 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 RPGRQ92834 1020 aaKnown RBP5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 DHX29Q7Z478 1369 aaKnown RBP5.67□□□□□ -1.5
NSMCE2-211ENST00000523549 CLIP1P30622 1438 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 ABCA3Q99758 1704 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 NEXMIFQ5QGS0 1516 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 HOXA3O43365 443 aaPredicted RBP5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 IGFALSP35858 605 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 PTTG1IPP53801 180 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 NPEPPSP55786 919 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 PTPAQ15257 358 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 FNDC3BQ53EP0 1204 aaKnown RBP5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 CREB3L3Q68CJ9 461 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 UNQ6494/PRO21346Q6UXR6 183 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 LRRC55Q6ZSA7 311 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 ARL8AQ96BM9 186 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 SRPK1Q96SB4 655 aaKnown RBP5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 B4GALT6Q9UBX8 382 aa5.66□□□□□ -1.5
NSMCE2-211ENST00000523549 NOS1P29475 1434 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 ADGRL3Q9HAR2 1447 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 H7C1D1 291 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 PPFIA4O75335 1185 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 TOMM70O94826 608 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 ABHD16AO95870 558 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 NUDT3O95989 172 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 GNAT2P19087 354 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 IL12RB1P42701 662 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 ADCY2Q08462 1091 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 ADCY1Q08828 1119 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 ESRP1Q6NXG1 681 aaKnown RBP5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 PDCD2LQ9BRP1 358 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 TOR3AQ9H497 397 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 PCIF1Q9H4Z3 704 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 SYNPO2LQ9H987 977 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 NCDNQ9UBB6 729 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 SYNPO2Q9UMS6 1093 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 SORCS3Q9UPU3 1222 aa5.65□□□□□ -1.5
NSMCE2-211ENST00000523549 XRN1Q8IZH2 1706 aaKnown RBP5.65□□□□□ -1.51
NSMCE2-211ENST00000523549 AHRRA9YTQ3 701 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 TRIM24O15164 1050 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 OPHN1O60890 802 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 DNAJC8O75937 253 aaPredicted RBP5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 PRPF6O94906 941 aaKnown RBP5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 CFBP00751 764 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 ASLP04424 464 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 GAAP10253 952 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 HK1P19367 917 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 ZNF174Q15697 407 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 MAN2A1Q16706 1144 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 PLEKHG4Q58EX7 1191 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 SOGA3Q5TF21 947 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 CPT1CQ8TCG5 803 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 ELF4Q99607 663 aaPredicted RBP5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 MTG2Q9H4K7 406 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 ZNF768Q9H5H4 540 aaKnown RBP5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 ING3Q9NXR8 418 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 PODXL2Q9NZ53 605 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 SPO11Q9Y5K1 396 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 TNPO3Q9Y5L0 923 aaKnown RBP5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 SBF2Q86WG5 1849 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 DHX57Q6P158 1386 aaKnown RBP5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 C1orf167Q5SNV9 1468 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 CACNA1AO00555 2505 aa5.64□□□□□ -1.51
NSMCE2-211ENST00000523549 CBX4O00257 560 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 FSBPO95073 299 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 SLC9A1P19634 815 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 TAP1Q03518 808 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 ZNF460Q14592 562 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 FAM214AQ32MH5 1076 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 KIAA1841Q6NSI8 718 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 KCNV1Q6PIU1 500 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 PHYKPLQ8IUZ5 450 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 MYEOVQ96EZ4 313 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 ZNF764Q96H86 408 aaPredicted RBP5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 MYL10Q9BUA6 226 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 MTFR1LQ9H019 292 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 CABP5Q9NP86 173 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 RPRD2Q5VT52 1461 aaKnown RBP5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 PXDNQ92626 1479 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 PRXQ9BXM0 1461 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 TOPAZ1Q8N9V7 1692 aa5.63□□□□□ -1.51
NSMCE2-211ENST00000523549 CENPVL1A0A0U1RR11 272 aa5.62□□□□□ -1.51
NSMCE2-211ENST00000523549 MAFGO15525 162 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms