RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 DPP7Q9UHL4 492 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 HCFC2Q9Y5Z7 792 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 CLIC4Q9Y696 253 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 BRD1O95696 1058 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 SLC39A14Q15043 492 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 PTPN14Q15678 1187 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 ARSHQ5FYA8 562 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 CES5AQ6NT32 575 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 ZPBP2Q6X784 338 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 RNF168Q8IYW5 571 aaPredicted RBP18.94■□□□□ 0.62
CCNC-213ENST00000523541 TMEM161BQ8NDZ6 487 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 RASSF8Q8NHQ8 419 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 SUSD6Q92537 303 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 PLIN2Q99541 437 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 LRFN3Q9BTN0 628 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 HERC2P3Q9BVR0 1158 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 TOPORSQ9NS56 1045 aaPredicted RBP18.94■□□□□ 0.62
CCNC-213ENST00000523541 KLK14Q9P0G3 267 aa18.94■□□□□ 0.62
CCNC-213ENST00000523541 SFI1A8K8P3 1242 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 C2CD2LO14523 706 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 RECQL4O94761 1208 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 URODP06132 367 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 MCF2P10911 925 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 PROZP22891 400 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 TXLNAP40222 546 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 GRM5P41594 1212 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 YARSP54577 528 aaKnown RBP18.93■□□□□ 0.62
CCNC-213ENST00000523541 EEF1DP3Q658K8 133 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 RAD54LQ92698 747 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 CCDC94Q9BW85 323 aaPredicted RBP18.93■□□□□ 0.62
CCNC-213ENST00000523541 PHF7Q9BWX1 381 aaPredicted RBP18.93■□□□□ 0.62
CCNC-213ENST00000523541 VN1R3Q9BXE9 311 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCNC-213ENST00000523541 CHST7Q9NS84 486 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 BLOC1S4Q9NUP1 217 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 MARCH5Q9NX47 278 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 STK17AQ9UEE5 414 aa18.93■□□□□ 0.62
CCNC-213ENST00000523541 FBXO2Q9UK22 296 aaPredicted RBP18.93■□□□□ 0.62
CCNC-213ENST00000523541 SLC16A4O15374 487 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 TADA2AO75478 443 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 TOM1L1O75674 476 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 EDN1P05305 212 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 MAPTP10636 758 aaKnown RBP18.92■□□□□ 0.62
CCNC-213ENST00000523541 PLCG1P19174 1290 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
CCNC-213ENST00000523541 KLRC2P26717 231 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 ZNF131P52739 623 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 DSG1Q02413 1049 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 CREMQ03060 361 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 CBX2Q14781 532 aaPredicted RBP18.92■□□□□ 0.62
CCNC-213ENST00000523541 USP41Q3LFD5 358 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 XKR4Q5GH76 650 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 KIAA0319Q5VV43 1072 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 KIAA1841Q6NSI8 718 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 SYCE2Q6PIF2 218 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 ELMSAN1Q6PJG2 1045 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 TAS1R3Q7RTX0 852 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 RNF135Q8IUD6 432 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 SLC22A17Q8WUG5 538 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 LARP4BQ92615 738 aaKnown RBP18.92■□□□□ 0.62
CCNC-213ENST00000523541 UROC1Q96N76 676 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 NECTIN4Q96NY8 510 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 KLHL5Q96PQ7 755 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 TCHPQ9BT92 498 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 ADAM7Q9H2U9 754 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 PARVGQ9HBI0 331 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 RXFP1Q9HBX9 757 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 RAPGEFL1Q9UHV5 662 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 MUTYHQ9UIF7 546 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 ADAM28Q9UKQ2 775 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 HCN4Q9Y3Q4 1203 aa18.92■□□□□ 0.62
CCNC-213ENST00000523541 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.92■□□□□ 0.62
CCNC-213ENST00000523541 PTGESO14684 152 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 HSP90AA1P07900 732 aaKnown RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 NASPP49321 788 aaPredicted RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 GLUD2P49448 558 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 NCKAP1LP55160 1127 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 GRIN1Q05586 938 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 ELAVL2Q12926 359 aaKnown RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 HSP90AA2PQ14568 343 aaPredicted RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 RARS2Q5T160 578 aaKnown RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 MPZL3Q6UWV2 235 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 ALKAL1Q6UXT8 129 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 GPBP1Q86WP2 473 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 HDAC7Q8WUI4 952 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 ZNF396Q96N95 335 aaPredicted RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 TARS2Q9BW92 718 aaKnown RBP18.91■□□□□ 0.62
CCNC-213ENST00000523541 FNIP2Q9P278 1114 aa18.91■□□□□ 0.62
CCNC-213ENST00000523541 C5orf42Q9H799 3197 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 GPR37L1O60883 481 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 ADH1AP07327 375 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 CNPP09543 421 aaKnown RBP18.9■□□□□ 0.62
CCNC-213ENST00000523541 MARCKSP29966 332 aaPredicted RBP18.9■□□□□ 0.62
CCNC-213ENST00000523541 RAD51AP2Q09MP3 1159 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 NAB2Q15742 525 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 KYAT1Q16773 422 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 ZNF568Q3ZCX4 644 aa18.9■□□□□ 0.62
CCNC-213ENST00000523541 FUT10Q6P4F1 479 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms