RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ASAP2O43150 1006 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 F2P00734 622 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 GPC3P51654 580 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 CHMP4BP1P59074 171 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 FNBP1Q96RU3 617 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 TCHPQ9BT92 498 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 PACSIN1Q9BY11 444 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 RAB20Q9NX57 234 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 MRFAP1Q9Y605 127 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 CNTNAP2Q9UHC6 1331 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 A0A087WZ62 844 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 CTAGE9A4FU28 777 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 FOXN3O00409 490 aaPredicted RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 ACKR2O00590 384 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 PJA2O43164 708 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 CSDE1O75534 798 aaKnown RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 SLU7O95391 586 aaKnown RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 TNNI1P19237 187 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 PRPF4BQ13523 1007 aaKnown RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 SECISBP2LQ93073 1101 aaKnown RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 KREMEN1Q96MU8 473 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 NAPGQ99747 312 aaPredicted RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 FDXACB1Q9BRP7 624 aaPredicted RBP22.49■■□□□ 1.19
SQLE-206ENST00000523430 NFKBIZQ9BYH8 718 aa22.49■■□□□ 1.19
SQLE-206ENST00000523430 PROZP22891 400 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 PHKA2P46019 1235 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 MCL1Q07820 350 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 ATF7IP2Q5U623 682 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 TDRD10Q5VZ19 366 aaKnown RBP22.48■■□□□ 1.19
SQLE-206ENST00000523430 TSHZ1Q6ZSZ6 1077 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 CDR2LQ86X02 465 aaPredicted RBP22.48■■□□□ 1.19
SQLE-206ENST00000523430 PPM1KQ8N3J5 372 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 KAT2BQ92831 832 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 PI4K2AQ9BTU6 479 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 SETD4Q9NVD3 440 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 SALL4Q9UJQ4 1053 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 CAPN6Q9Y6Q1 641 aa22.48■■□□□ 1.19
SQLE-206ENST00000523430 ZNF568Q3ZCX4 644 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 EEF1DP3Q658K8 133 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 BRSK2Q8IWQ3 736 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 LNX1Q8TBB1 728 aaPredicted RBP22.47■■□□□ 1.19
SQLE-206ENST00000523430 HELQQ8TDG4 1101 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 LMBR1Q8WVP7 490 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 PTPRHQ9HD43 1115 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 NENFQ9UMX5 172 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 DDX3XO00571 662 aaKnown RBP eCLIP22.47■■□□□ 1.194e-43■■■■■ 54.8
SQLE-206ENST00000523430 DYNC1I1O14576 645 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 AOC2O75106 756 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 MOCS3O95396 460 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 TMOD1P28289 359 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 KIAA0753Q2KHM9 967 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 ZACNQ401N2 412 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 MPZL3Q6UWV2 235 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 DNAAF5Q86Y56 855 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 NT5C1BQ96P26 610 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 CGRRF1Q99675 332 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 SYT11Q9BT88 431 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 NAGPAQ9UK23 515 aa22.47■■□□□ 1.19
SQLE-206ENST00000523430 TBC1D8O95759 1140 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 C4BPAP04003 597 aaKnown RBP22.46■■□□□ 1.19
SQLE-206ENST00000523430 SMIM10L2AP0DMW4 78 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 SMIM10L2BP0DMW5 78 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 ANXA13P27216 316 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 PSMC4P43686 418 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 FCGRTP55899 365 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 BEX3Q00994 111 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 HSP90AA2PQ14568 343 aaPredicted RBP22.46■■□□□ 1.19
SQLE-206ENST00000523430 KIF22Q14807 665 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 TMEM132AQ24JP5 1023 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 TRPV1Q8NER1 839 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 GABRQQ9UN88 632 aa22.46■■□□□ 1.19
SQLE-206ENST00000523430 ENC1O14682 589 aa22.45■■□□□ 1.19
SQLE-206ENST00000523430 OGTO15294 1046 aa22.45■■□□□ 1.19
SQLE-206ENST00000523430 NAA30Q147X3 362 aaPredicted RBP22.45■■□□□ 1.19
SQLE-206ENST00000523430 AMHR2Q16671 573 aa22.45■■□□□ 1.19
SQLE-206ENST00000523430 OR5B17Q8NGF7 314 aa22.45■■□□□ 1.19
SQLE-206ENST00000523430 MAP7D2Q96T17 732 aa22.45■■□□□ 1.19
SQLE-206ENST00000523430 LUC7LQ9NQ29 371 aaKnown RBP22.45■■□□□ 1.19
SQLE-206ENST00000523430 PRMT7Q9NVM4 692 aaPredicted RBP22.45■■□□□ 1.19
SQLE-206ENST00000523430 VNN1O95497 513 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 PIK3CAP42336 1068 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 LACTBP83111 547 aaPredicted RBP22.45■■□□□ 1.18
SQLE-206ENST00000523430 POU5F1BQ06416 359 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 BIRC3Q13489 604 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 MFSD10Q14728 455 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 VPS36Q86VN1 386 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 IFNLR1Q8IU57 520 aaPredicted RBP22.45■■□□□ 1.18
SQLE-206ENST00000523430 FMNL3Q8IVF7 1028 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 GLYCTKQ8IVS8 523 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 KIAA0319LQ8IZA0 1049 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 TXLNBQ8N3L3 684 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 CEP120Q8N960 986 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 NLRP7Q8WX94 980 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 TATDN2Q93075 761 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 CDT1Q9H211 546 aa22.45■■□□□ 1.18
SQLE-206ENST00000523430 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.45■■□□□ 1.18
SQLE-206ENST00000523430 CPSF3Q9UKF6 684 aaKnown RBP22.45■■□□□ 1.18
SQLE-206ENST00000523430 V9GYY5 206 aaPredicted RBP22.45■■□□□ 1.18
SQLE-206ENST00000523430 HLA-DRAP01903 254 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 ATP1A1P05023 1023 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms