RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 SLC9A2Q9UBY0 812 aa6.72□□□□□ -1.33
SPIDR-216ENST00000521918 GPN3Q9UHW5 284 aaPredicted RBP6.72□□□□□ -1.33
SPIDR-216ENST00000521918 GBF1Q92538 1859 aa6.72□□□□□ -1.33
SPIDR-216ENST00000521918 LOC100289279A0A1B0GTE1 492 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 C17orf102A2RUQ5 167 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 MBLAC1A4D2B0 266 aaPredicted RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 F8W735 103 aaPredicted RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 MSTNO14793 375 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 NBNO60934 754 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 DTNBO60941 627 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 FGBP02675 491 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 FDPSP14324 419 aaKnown RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 VAMP1P23763 118 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 GNA11P29992 359 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 ACTR2P61160 394 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 SETQ01105 290 aaPredicted RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 AKAP17AQ02040 695 aaKnown RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 NRG1Q02297 640 aaPredicted RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 SP4Q02446 784 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 SSRP1Q08945 709 aaKnown RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 BFSP2Q13515 415 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 ANKRD1Q15327 319 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 ME3Q16798 604 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 MARCH8Q5T0T0 291 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 MCTP2Q6DN12 878 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 ABHD15Q6UXT9 468 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 LRRC8DQ7L1W4 858 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 NSUN7Q8NE18 718 aaKnown RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 BICD2Q8TD16 824 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 SEPT1Q8WYJ6 367 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 MRRFQ96E11 262 aaKnown RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 MBOAT7Q96N66 472 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 SPOCK3Q9BQ16 436 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 PHF20Q9BVI0 1012 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 CEP44Q9C0F1 390 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 SETD4Q9NVD3 440 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 ZNF215Q9UL58 517 aaPredicted RBP6.71□□□□□ -1.34
SPIDR-216ENST00000521918 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
SPIDR-216ENST00000521918 CYP3A7-CYP3A51PA0A087WV96 503 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 IPO5O00410 1097 aaKnown RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CPLX1O14810 134 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 EIF5BO60841 1220 aaKnown RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CAND2O75155 1236 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CDKL5O76039 1030 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 BAIAP3O94812 1187 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 RECKO95980 971 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 PROCP04070 461 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CYP11A1P05108 521 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CYP3A7P24462 503 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 MAOBP27338 520 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CHMP4BP1P59074 171 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 PLCB4Q15147 1175 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 DUOXA2Q1HG44 320 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 ZNF618Q5T7W0 954 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 UTP14CQ5TAP6 766 aaKnown RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 B3GNT9Q6UX72 402 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 Q6ZS46 218 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 ACAD11Q709F0 780 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 OTOP2Q7RTS6 562 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 DEFB128Q7Z7B8 93 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 RPAINQ86UA6 219 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 CCDC60Q8IWA6 550 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 RPUSD2Q8IZ73 545 aaKnown RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 BLIDQ8IZY5 108 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 TBCKQ8TEA7 893 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 ATP6V0A1Q93050 837 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 BACH2Q9BYV9 841 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 SLKQ9H2G2 1235 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 GJB4Q9NTQ9 266 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 YBX2Q9Y2T7 364 aaKnown RBP6.7□□□□□ -1.34
SPIDR-216ENST00000521918 MICAL3Q7RTP6 2002 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 COL4A6Q14031 1691 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 NRCAMQ92823 1304 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 IGSF9BQ9UPX0 1349 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 WDR81Q562E7 1941 aa6.7□□□□□ -1.34
SPIDR-216ENST00000521918 MYO9BQ13459 2157 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 MSH4O15457 936 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 JAK2O60674 1132 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 ALX3O95076 343 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 PARNO95453 639 aaKnown RBP6.69□□□□□ -1.34
SPIDR-216ENST00000521918 TDP2O95551 362 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 BMP6P22004 513 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 NME2P22392 152 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 MARK3P27448 753 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 NOS3P29474 1203 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 GATA4P43694 442 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 USP11P51784 963 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 NEK4P51957 841 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 NLRP5P59047 1200 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 WDR5P61964 334 aaKnown RBP6.69□□□□□ -1.34
SPIDR-216ENST00000521918 MGAT3Q09327 533 aa6.69□□□□□ -1.34
SPIDR-216ENST00000521918 PPFIA1Q13136 1202 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms