RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 UBXN2AP68543 259 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 PPATQ06203 517 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 BAATQ14032 418 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 GRIN2CQ14957 1233 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 TMEM132BQ14DG7 1078 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 ASIC2Q16515 512 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 SLC18A3Q16572 532 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 SAMD5Q5TGI4 173 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 KLHDC7AQ5VTJ3 777 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 IQCEQ6IPM2 695 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 DPY19L2P1Q6NXN4 242 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 ZNF572Q7Z3I7 529 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 DAW1Q8N136 415 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 MSL3Q8N5Y2 521 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 MSANTD4Q8NCY6 345 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 MCPH1Q8NEM0 835 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 NLGN2Q8NFZ4 835 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 SECISBP2LQ93073 1101 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 ZKSCAN4Q969J2 545 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 ACDQ96AP0 544 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CCDC43Q96MW1 224 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 NTPCRQ9BSD7 190 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 A1CFQ9NQ94 594 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 RNF14Q9UBS8 474 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 PPP1R1BQ9UD71 204 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 PHF24Q9UPV7 400 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 FRMD4BQ9Y2L6 1034 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 JRKLQ9Y4A0 524 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 PCDHA13Q9Y5I0 950 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CSADQ9Y600 493 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 SNCAIPQ9Y6H5 919 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 LCTP09848 1927 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 WDR81Q562E7 1941 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 IGSF9BQ9UPX0 1349 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 A0A0G2JLL6 359 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CTAGE15A4D2H0 777 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CCDC151A5D8V7 595 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 K7ENM7 598 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CES2O00748 559 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 ZNF263O14978 683 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 EFSO43281 561 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 USP2O75604 605 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 EIF3JO75822 258 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 SLC25A27O95847 323 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CCNE2O96020 404 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CELA2BP08218 269 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CTAGE8P0CG41 777 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 FAM157BP0CG42 384 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 KRT13P13646 458 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 FERP16591 822 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 TCP1P17987 556 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 EDNRBP24530 442 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 PON1P27169 355 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 NMT1P30419 496 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 NF2P35240 595 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 MAGEA1P43355 309 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 IREB2P48200 963 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 JAM2P57087 298 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 POLR2FP61218 127 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 RBM10P98175 930 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 RAD51AP2Q09MP3 1159 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CETN1Q12798 172 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 BFSP1Q12934 665 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 VGLL4Q14135 290 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 BRD3Q15059 726 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 IFI16Q16666 785 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 ERCC6LQ2NKX8 1250 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 MIS18BP1Q6P0N0 1132 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 NSMFQ6X4W1 530 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CAPN12Q6ZSI9 719 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 USP50Q70EL3 339 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 PRRT2Q7Z6L0 340 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 USP37Q86T82 979 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CTAGE6Q86UF2 777 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 VPS36Q86VN1 386 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 MAP4K3Q8IVH8 894 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 CTAGE4Q8IX94 777 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 SMCR8Q8TEV9 937 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 DCPSQ96C86 337 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 EEF2KMTQ96G04 330 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 SUSD3Q96L08 255 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 FAM81BQ96LP2 452 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 MPHOSPH6Q99547 160 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 JPH1Q9HDC5 661 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 DDX41Q9UJV9 622 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 NENFQ9UMX5 172 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 RIPK3Q9Y572 518 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 GPC6Q9Y625 555 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 SAR1BQ9Y6B6 198 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 SIP14410 1827 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 SCN4AP35499 1836 aa7.29□□□□□ -1.24
CTNNA1-228ENST00000521640 KIAA1217Q5T5P2 1943 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms