RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PIN4Q9Y237 131 aaKnown RBP16.37■□□□□ 0.21
SREK1-209ENST00000520953 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 LRRIQ3A6PVS8 624 aaPredicted RBP16.37■□□□□ 0.21
SREK1-209ENST00000520953 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
SREK1-209ENST00000520953 TPM2P07951 284 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 COL6A1P12109 1028 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 VAMP7P51809 220 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 CDC42EP1Q00587 391 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 KCNMA1Q12791 1236 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 SLC39A5Q6ZMH5 540 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 ELMO3Q96BJ8 720 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 PAWRQ96IZ0 340 aaKnown RBP16.37■□□□□ 0.21
SREK1-209ENST00000520953 MFSD14AQ96MC6 490 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 METTL14Q9HCE5 456 aaKnown RBP16.37■□□□□ 0.21
SREK1-209ENST00000520953 PDE11AQ9HCR9 933 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 AGPAT5Q9NUQ2 364 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 HES2Q9Y543 173 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 EPHB6O15197 1021 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 NPTXRO95502 500 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 DLATP10515 647 aaKnown RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 CD52P31358 61 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 GCLMP48507 274 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 TRIM60Q495X7 471 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 RBAKQ9NYW8 714 aaPredicted RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 ST3GAL5Q9UNP4 418 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 ZNF233A6NK53 670 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 M0QZ92 97 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 OGTO15294 1046 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 CD4P01730 458 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 AFPP02771 609 aaKnown RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 SFPQP23246 707 aaKnown RBP eCLIP16.36■□□□□ 0.21
SREK1-209ENST00000520953 CCZ1BP86790 482 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 CCZ1P86791 482 aaPredicted RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 NFX1Q12986 1120 aaKnown RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 LPIN1Q14693 890 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 INTS8Q75QN2 995 aaKnown RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 PARD3BQ8TEW8 1205 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.36■□□□□ 0.215e-7■■■■■ 81.2
SREK1-209ENST00000520953 IMPACTQ9P2X3 320 aa16.36■□□□□ 0.21
SREK1-209ENST00000520953 CPSF3Q9UKF6 684 aaKnown RBP16.36■□□□□ 0.21
SREK1-209ENST00000520953 RPS6KA5O75582 802 aa16.35■□□□□ 0.21
SREK1-209ENST00000520953 CXCL8P10145 99 aa16.35■□□□□ 0.21
SREK1-209ENST00000520953 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
SREK1-209ENST00000520953 UBXN11Q5T124 520 aa16.35■□□□□ 0.21
SREK1-209ENST00000520953 ZNF516Q92618 1163 aa16.35■□□□□ 0.21
SREK1-209ENST00000520953 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
SREK1-209ENST00000520953 SIK3Q9Y2K2 1263 aa16.35■□□□□ 0.21
SREK1-209ENST00000520953 ACTN1P12814 892 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 KRT13P13646 458 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 GSDMDP57764 484 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 TLE2Q04725 743 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 SPECC1LQ69YQ0 1117 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 PRDM10Q9NQV6 1147 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 ANK1P16157 1881 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 MAPK13O15264 365 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 STAG3L1P0CL83 205 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 SLC9A1P19634 815 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 FMO5P49326 533 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 FAM26DQ5JW98 314 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
SREK1-209ENST00000520953 PADI3Q9ULW8 664 aa16.34■□□□□ 0.21
SREK1-209ENST00000520953 MGEA5O60502 916 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 GYPCP04921 128 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 MCF2P10911 925 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 SKILP12757 684 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 FAAP100Q0VG06 881 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 TBX2Q13207 712 aaPredicted RBP16.33■□□□□ 0.2
SREK1-209ENST00000520953 GPNMBQ14956 572 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 LRRC26Q2I0M4 334 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 FKBP15Q5T1M5 1219 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 NOTUMQ6P988 496 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 BRSK2Q8IWQ3 736 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 OR5B17Q8NGF7 314 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 TMEM117Q9H0C3 514 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 FAM207AQ9NSI2 230 aaPredicted RBP16.33■□□□□ 0.2
SREK1-209ENST00000520953 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 LAMA2P24043 3122 aaKnown RBP16.33■□□□□ 0.2
SREK1-209ENST00000520953 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 UQCRHP07919 91 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 EN2P19622 333 aaPredicted RBP16.33■□□□□ 0.2
SREK1-209ENST00000520953 FXR1P51114 621 aaKnown RBP eCLIP16.33■□□□□ 0.2
SREK1-209ENST00000520953 RBL2Q08999 1139 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 PSMD6Q15008 389 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 SLC27A1Q6PCB7 646 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 PCMTD1Q96MG8 357 aaPredicted RBP16.33■□□□□ 0.2
SREK1-209ENST00000520953 ERGIC2Q96RQ1 377 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 APOL6Q9BWW8 343 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 ERVK-5Q9HDB9 667 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.2
SREK1-209ENST00000520953 MEIS3P2A8K0S8 358 aa16.32■□□□□ 0.2
SREK1-209ENST00000520953 LDHAP00338 332 aaKnown RBP16.32■□□□□ 0.2
SREK1-209ENST00000520953 IBSPP21815 317 aaPredicted RBP16.32■□□□□ 0.2
SREK1-209ENST00000520953 AKAP5P24588 427 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms