RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 CERS4Q9HA82 394 aa8.12□□□□□ -1.11
TRAPPC9-207ENST00000520532 NGRNQ9NPE2 291 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-207ENST00000520532 SLC38A7Q9NVC3 462 aa8.12□□□□□ -1.11
TRAPPC9-207ENST00000520532 CNTN3Q9P232 1028 aa8.12□□□□□ -1.11
TRAPPC9-207ENST00000520532 PUF60Q9UHX1 559 aaKnown RBP8.12□□□□□ -1.11
TRAPPC9-207ENST00000520532 STYXL1Q9Y6J8 313 aa8.12□□□□□ -1.11
TRAPPC9-207ENST00000520532 VWA8A3KMH1 1905 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.111e-7■■■■■ 172.3
TRAPPC9-207ENST00000520532 TTLL13PA6NNM8 815 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 FSCN2O14926 492 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 GRM6O15303 877 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 POLR2DO15514 142 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 ACTN4O43707 911 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 FAM189A1O60320 539 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 EFEMP2O95967 443 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SRGAP2BP0DMP2 458 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 KCNE1P15382 129 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 IGFBP4P22692 258 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 PAX3P23760 479 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SCNN1GP51170 649 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 BCAR1P56945 870 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SNRPFP62306 86 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 EHHADHQ08426 723 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 ELAVL2Q12926 359 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 COASYQ13057 564 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 DHX8Q14562 1220 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SMC1AQ14683 1233 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 NAB2Q15742 525 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 L1TD1Q5T7N2 865 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 EEF1DP3Q658K8 133 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 UNC13DQ70J99 1090 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 ZNF720Q7Z2F6 126 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 DDX53Q86TM3 631 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 CD302Q8IX05 232 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 COLGALT2Q8IYK4 626 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 TMEM87AQ8NBN3 555 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 GSTCDQ8NEC7 633 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 POF1BQ8WVV4 589 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 PABPC5Q96DU9 382 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 BICD1Q96G01 975 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 GAD1Q99259 594 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 C7orf25Q9BPX7 421 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 TARS2Q9BW92 718 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 ZBP1Q9H171 429 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 NRDE2Q9H7Z3 1164 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 TMEM206Q9H813 350 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 MRPL44Q9H9J2 332 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 PLEKHA5Q9HAU0 1116 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 CGNQ9P2M7 1197 aaKnown RBP8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 ANKFY1Q9P2R3 1169 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 SSX2IPQ9Y2D8 614 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 HES2Q9Y543 173 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
TRAPPC9-207ENST00000520532 MTCL1Q9Y4B5 1905 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 A0A0B4J269 797 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 NPHP3-ACAD11A0A0J9YXS1 232 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 SFI1A8K8P3 1242 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PTGESO14684 152 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 OGTO15294 1046 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 XPOTO43592 962 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 THP07101 528 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 ADRB2P07550 413 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 GALTP07902 379 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 CLTAP09496 248 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 IDEP14735 1019 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 SYKP43405 635 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 SLC11A1P49279 550 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 ASIC1P78348 528 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PPP2R3AQ06190 1150 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 CAMK1Q14012 370 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 POSTNQ15063 836 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 BMT2Q1RMZ1 405 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 CTC1Q2NKJ3 1217 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PUS10Q3MIT2 529 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 FOXD4L6Q3SYB3 417 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 FAM26FQ5R3K3 315 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PDXDC1Q6P996 788 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 ALKAL1Q6UXT8 129 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 FOXD4L3Q6VB84 417 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 DYMQ7RTS9 669 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 CDR2LQ86X02 465 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 NT5DC4Q86YG4 428 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 TMEM174Q8WUU8 243 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PPP1R10Q96QC0 940 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 TCHPQ9BT92 498 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 HERC2P3Q9BVR0 1158 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 GTPBP4Q9BZE4 634 aaKnown RBP8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 ZHX3Q9H4I2 956 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 PANK4Q9NVE7 773 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 SNTG2Q9NY99 539 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
TRAPPC9-207ENST00000520532 DNAJB4Q9UDY4 337 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms