RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 C17orf102A2RUQ5 167 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 RBAK-RBAKDNI3L0D1 243 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 FKTNO75072 461 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 ZC3H11AO75152 810 aaKnown RBP eCLIP17.39■□□□□ 0.377e-6■■■■■ 33.7
SNHG6-201ENST00000520348 C4BPAP04003 597 aaKnown RBP17.39■□□□□ 0.37
SNHG6-201ENST00000520348 SERPING1P05155 500 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 MCF2P10911 925 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 GNAT1P11488 350 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 CYP2C9P11712 490 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 ELNP15502 786 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
SNHG6-201ENST00000520348 CYLC1P35663 651 aaPredicted RBP17.39■□□□□ 0.37
SNHG6-201ENST00000520348 ACOT2P49753 483 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.39■□□□□ 0.37
SNHG6-201ENST00000520348 RUFY4Q6ZNE9 571 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 IRF2BP2Q7Z5L9 587 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 FMNL3Q8IVF7 1028 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 ZNF516Q92618 1163 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 DESI2Q9BSY9 194 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 PDZD7Q9H5P4 517 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
SNHG6-201ENST00000520348 TRMT1Q9NXH9 659 aaKnown RBP17.39■□□□□ 0.37
SNHG6-201ENST00000520348 HDAC6Q9UBN7 1215 aa17.39■□□□□ 0.37
SNHG6-201ENST00000520348 F8VZ95 297 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 TSPAN1O60635 241 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 AP3M2P53677 418 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 SURF1Q15526 300 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 KYAT1Q16773 422 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 ZNF568Q3ZCX4 644 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 SLC9C1Q4G0N8 1177 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 GNASQ5JWF2 1037 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 PHLDB3Q6NSJ2 640 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 RPAINQ86UA6 219 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 NME8Q8N427 588 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 FBXL13Q8NEE6 735 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 XPNPEP3Q9NQH7 507 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 DNAJC12Q9UKB3 198 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 PTPRJQ12913 1337 aa17.38■□□□□ 0.37
SNHG6-201ENST00000520348 A0A1B0GUA9 196 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 TREHO43280 583 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 PGK1P00558 417 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 DARSP14868 501 aaKnown RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ARF4P18085 180 aaPredicted RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ARHGAP25P42331 645 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ARHGEF6Q15052 776 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 PTPN14Q15678 1187 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ASIC2Q16515 512 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 TAF2Q6P1X5 1199 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 GJB7Q6PEY0 223 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 WDR49Q8IV35 697 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ACRBPQ8NEB7 543 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 OLIG1Q8TAK6 271 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 TAS1R2Q8TE23 839 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 NLRP7Q8WX94 980 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 SEMA4DQ92854 862 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ZNF668Q96K58 619 aaPredicted RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 C16orf45Q96MC5 204 aaPredicted RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 SPAG5Q96R06 1193 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 POP1Q99575 1024 aaKnown RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 SYT11Q9BT88 431 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 GCOM2Q9BZD3 368 aaPredicted RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 PDE11AQ9HCR9 933 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 DDX20Q9UHI6 824 aaKnown RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 NENFQ9UMX5 172 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 BZW2Q9Y6E2 419 aaKnown RBP17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ATP8B3O60423 1300 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 ANK1P16157 1881 aa17.37■□□□□ 0.37
SNHG6-201ENST00000520348 FRMPD3Q5JV73 1810 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 ZNF263O14978 683 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 B4GALT4O60513 344 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 GFPT2O94808 682 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 RPLP2P05387 115 aaKnown RBP17.36■□□□□ 0.37
SNHG6-201ENST00000520348 PLEKP08567 350 aaPredicted RBP17.36■□□□□ 0.37
SNHG6-201ENST00000520348 FERP16591 822 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 SOX5P35711 763 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 EIF4A3P38919 411 aaKnown RBP17.36■□□□□ 0.37
SNHG6-201ENST00000520348 TNFSF9P41273 254 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 STAT1P42224 750 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 KIF11P52732 1056 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 KRT83P78385 493 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 MAP2K1Q02750 393 aaPredicted RBP17.36■□□□□ 0.37
SNHG6-201ENST00000520348 TDRD10Q5VZ19 366 aaKnown RBP17.36■□□□□ 0.37
SNHG6-201ENST00000520348 ARHGEF19Q8IW93 802 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 C7orf31Q8N865 590 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 HELQQ8TDG4 1101 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
SNHG6-201ENST00000520348 CCDC42Q96M95 316 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 FNBP1Q96RU3 617 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 RAB20Q9NX57 234 aa17.36■□□□□ 0.37
SNHG6-201ENST00000520348 VNN1O95497 513 aa17.35■□□□□ 0.37
SNHG6-201ENST00000520348 DLATP10515 647 aaKnown RBP17.35■□□□□ 0.37
SNHG6-201ENST00000520348 TNNT1P13805 278 aa17.35■□□□□ 0.37
SNHG6-201ENST00000520348 MATR3P43243 847 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNHG6-201ENST00000520348 HTRA3P83110 453 aa17.35■□□□□ 0.37
SNHG6-201ENST00000520348 ZNF200P98182 395 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms