RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 GLUD1P00367 558 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 THP07101 528 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 HSP90AA2PQ14568 343 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-220ENST00000519767 FUT10Q6P4F1 479 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 SUGP1Q8IWZ8 645 aaKnown RBP27.9■■■□□ 2.06
VEGFA-220ENST00000519767 KREMEN2Q8NCW0 462 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 ACSF2Q96CM8 615 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-220ENST00000519767 RHOBTB2Q9BYZ6 727 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 GPR62Q9BZJ7 368 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 FNIP2Q9P278 1114 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 SORCS3Q9UPU3 1222 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 PHLPP2Q6ZVD8 1323 aa27.9■■■□□ 2.06
VEGFA-220ENST00000519767 F8W810 466 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 H3BQV1 296 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 MTMR3Q13615 1198 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 IL17AQ16552 155 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 OTOP3Q7RTS5 596 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 FBXL6Q8N531 539 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 PLEKHA4Q9H4M7 779 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 POLD4Q9HCU8 107 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 KCNG1Q9UIX4 513 aa27.89■■■□□ 2.06
VEGFA-220ENST00000519767 RBM19Q9Y4C8 960 aaKnown RBP27.89■■■□□ 2.06
VEGFA-220ENST00000519767 HOXD11P31277 338 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-220ENST00000519767 NT5DC1Q5TFE4 455 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 ATF7IP2Q5U623 682 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 ASIC4Q96FT7 647 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 DRC1Q96MC2 740 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 PRRX2Q99811 253 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 TIPINQ9BVW5 301 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 C17orf75Q9HAS0 396 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 MAN1C1Q9NR34 630 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 LIMD1Q9UGP4 676 aa27.88■■■□□ 2.05
VEGFA-220ENST00000519767 SF3B1O75533 1304 aaKnown RBP eCLIP27.88■■■□□ 2.056e-7■■■■■ 31.1
VEGFA-220ENST00000519767 ZDBF2Q9HCK1 2354 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 CCDC169A6NNP5 214 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 E9PMD0 336 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 RECQL4O94761 1208 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 GJB2P29033 226 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 CCDC149Q6ZUS6 474 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 RIN2Q8WYP3 895 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-220ENST00000519767 KIFC3Q9BVG8 833 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 TMEM134Q9H6X4 195 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 TNFSF13BQ9Y275 285 aa27.87■■■□□ 2.05
VEGFA-220ENST00000519767 PTGESO14684 152 aa27.86■■■□□ 2.05
VEGFA-220ENST00000519767 NPTX2P47972 431 aa27.86■■■□□ 2.05
VEGFA-220ENST00000519767 ATP2C1P98194 919 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-220ENST00000519767 ELAVL2Q12926 359 aaKnown RBP27.86■■■□□ 2.05
VEGFA-220ENST00000519767 EEF1DP3Q658K8 133 aa27.86■■■□□ 2.05
VEGFA-220ENST00000519767 MMTAG2Q9BU76 263 aaKnown RBP27.86■■■□□ 2.05
VEGFA-220ENST00000519767 USP20Q9Y2K6 914 aa27.86■■■□□ 2.05
VEGFA-220ENST00000519767 ZNF318Q5VUA4 2279 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 CCDC195A0A1B0GUA6 201 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 PP2D1A8MPX8 630 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 CDC25AP30304 524 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 PEX3P56589 373 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 DMP1Q13316 513 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-220ENST00000519767 ARL6IP4Q66PJ3 421 aaKnown RBP27.85■■■□□ 2.05
VEGFA-220ENST00000519767 RINT1Q6NUQ1 792 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 C1orf186Q6ZWK4 172 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 RABGGTAQ92696 567 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 NT5C3AQ9H0P0 336 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 GDAQ9Y2T3 454 aa27.85■■■□□ 2.05
VEGFA-220ENST00000519767 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-220ENST00000519767 WDFY4Q6ZS81 3184 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 HIP1RO75146 1068 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 EDN1P05305 212 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 HYIQ5T013 277 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 PDXDC1Q6P996 788 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 LILRA6Q6PI73 481 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 PALB2Q86YC2 1186 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 B3GALT6Q96L58 329 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 NTPCRQ9BSD7 190 aaKnown RBP27.84■■■□□ 2.05
VEGFA-220ENST00000519767 TTPALQ9BTX7 342 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 SMC3Q9UQE7 1217 aa27.84■■■□□ 2.05
VEGFA-220ENST00000519767 CASTOR2A6NHX0 329 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 PAPLNO95428 1278 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 GUCY2CP25092 1073 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 NAB2Q15742 525 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 STAMQ92783 540 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 ACO2Q99798 780 aaKnown RBP27.83■■■□□ 2.05
VEGFA-220ENST00000519767 PAAF1Q9BRP4 392 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 MRPL4Q9BYD3 311 aaKnown RBP27.83■■■□□ 2.05
VEGFA-220ENST00000519767 KMT5AQ9NQR1 393 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 ZDHHC7Q9NXF8 308 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 ARHGAP28Q9P2N2 729 aa27.83■■■□□ 2.05
VEGFA-220ENST00000519767 TDRD15B5MCY1 1934 aaKnown RBP27.82■■■□□ 2.04
VEGFA-220ENST00000519767 TGM5O43548 720 aa27.82■■■□□ 2.04
VEGFA-220ENST00000519767 BRD1O95696 1058 aa27.82■■■□□ 2.04
VEGFA-220ENST00000519767 FAM171A1Q5VUB5 890 aa27.82■■■□□ 2.04
VEGFA-220ENST00000519767 DAW1Q8N136 415 aa27.82■■■□□ 2.04
VEGFA-220ENST00000519767 RUSC1Q9BVN2 902 aa27.82■■■□□ 2.04
VEGFA-220ENST00000519767 WDR6Q9NNW5 1121 aaKnown RBP27.82■■■□□ 2.04
VEGFA-220ENST00000519767 TOPORSQ9NS56 1045 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-220ENST00000519767 KCND2Q9NZV8 630 aa27.82■■■□□ 2.04
VEGFA-220ENST00000519767 SLC26A4O43511 780 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 KIF4AO95239 1232 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 CD2BP2O95400 341 aaKnown RBP27.81■■■□□ 2.04
VEGFA-220ENST00000519767 SPATA31D3P0C874 917 aa27.81■■■□□ 2.04
VEGFA-220ENST00000519767 YARSP54577 528 aaKnown RBP27.81■■■□□ 2.04
VEGFA-220ENST00000519767 ZRSR1Q15695 479 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms