RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PTTG1IPP53801 180 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 TERF1P54274 439 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 NHLH1Q02575 133 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 ADCY2Q08462 1091 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 FOXI1Q12951 378 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 TAF7LQ5H9L4 462 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 KIAA1841Q6NSI8 718 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 PASD1Q8IV76 773 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 NXPE1Q8N323 547 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 FRAT1Q92837 279 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-209ENST00000519485 FEZ1Q99689 392 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 PDCL3Q9H2J4 239 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 ING3Q9NXR8 418 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 TRPM5Q9NZQ8 1165 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 ANKFY1Q9P2R3 1169 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 GCC2Q8IWJ2 1684 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 HMGXB3Q12766 1538 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 NAIPQ13075 1403 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 ZMYM3Q14202 1370 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 MAPK8IP3Q9UPT6 1336 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 GOLGA6L3A6NEY3 463 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 MARCH11A6NNE9 402 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 NCR1O76036 304 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 ALDH1A2O94788 518 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 ESRRBO95718 433 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 CFBP00751 764 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 ZSCAN20P17040 1043 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 TNNT2P45379 298 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 SCNN1BP51168 640 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 TIGD7Q6NT04 549 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 HDGFL2Q7Z4V5 671 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 NOP9Q86U38 636 aaKnown RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 AHI1Q8N157 1196 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 C7orf31Q8N865 590 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 PNISRQ8TF01 805 aaKnown RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 TRIM44Q96DX7 344 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 IL17RAQ96F46 866 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 HIST1H2AHQ96KK5 128 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 ELF4Q99607 663 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 HIST1H2AJQ99878 128 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 LRFN3Q9BTN0 628 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 OXSMQ9NWU1 459 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 THG1LQ9NWX6 298 aaKnown RBP4.32□□□□□ -1.72
CSMD3-209ENST00000519485 PLAAQ9Y263 795 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 FRMD4BQ9Y2L6 1034 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 PRDM2Q13029 1718 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 UNC13AQ9UPW8 1703 aa4.32□□□□□ -1.72
CSMD3-209ENST00000519485 EHBP1L1Q8N3D4 1523 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 RPRD2Q5VT52 1461 aaKnown RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 ROCK1Q13464 1354 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 NINLQ9Y2I6 1382 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 KIF7Q2M1P5 1343 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 ZNF891A8MT65 544 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 KPNA1P52294 538 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 FOXF2Q12947 444 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 EPHA10Q5JZY3 1008 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 ZNF362Q5T0B9 420 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 ARMC6Q6NXE6 501 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 ZZZ3Q8IYH5 903 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 PPM1KQ8N3J5 372 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 BOLLQ8N9W6 283 aaKnown RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 PIK3C3Q8NEB9 887 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 CAVIN3Q969G5 261 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 MFSD3Q96ES6 412 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 NAP1L5Q96NT1 182 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 NOL10Q9BSC4 688 aaKnown RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 TARS2Q9BW92 718 aaKnown RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 H2AFY2Q9P0M6 372 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-209ENST00000519485 SPO11Q9Y5K1 396 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 KIF21AQ7Z4S6 1674 aa4.31□□□□□ -1.72
CSMD3-209ENST00000519485 LRPPRCP42704 1394 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 ANKRD30AQ9BXX3 1397 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 CUL7Q14999 1698 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 PRPF6O94906 941 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 F2P00734 622 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 EGR2P11161 476 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 ATP2A2P16615 1042 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 RGS19P49795 217 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 GZMKP49863 264 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 IL2P60568 153 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 OCRLQ01968 901 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 GUCY1B3Q02153 619 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 PCBP1Q15365 356 aaKnown RBP eCLIP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 DDB1Q16531 1140 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 DALRD3Q5D0E6 543 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 ESRP1Q6NXG1 681 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 BTNL9Q6UXG8 535 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 KIF18BQ86Y91 864 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 CMTR2Q8IYT2 770 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 OR2W6PQ8NHA6 318 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 CHTF18Q8WVB6 975 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 RTF1Q92541 710 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 GPR101Q96P66 508 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 SLKQ9H2G2 1235 aaPredicted RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 MYH16Q9H6N6 1097 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 CC2D2AQ9P2K1 1620 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms