RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SEMA4GQ9NTN9 838 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 RAB23Q9ULC3 237 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 BRPF3Q9ULD4 1205 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 ASPMQ8IZT6 3477 aa9.39□□□□□ -0.91
CTNNA1-215ENST00000519309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 TSPAN1O60635 241 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 XYLBO75191 536 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 AXLP30530 894 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 USP11P51784 963 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 Q4G0T1 1027 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 NOTUMQ6P988 496 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 RTL10Q7L3V2 364 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 GSTCDQ8NEC7 633 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 CCDC148Q8NFR7 591 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 ITFG1Q8TB96 612 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 ETNPPLQ8TBG4 499 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 BICD2Q8TD16 824 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 PSPC1Q8WXF1 523 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 SLC7A3Q8WY07 619 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 CHAMP1Q96JM3 812 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 SH2D3AQ9BRG2 576 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 EIF2AQ9BY44 585 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 RNF39Q9H2S5 420 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 MIOSQ9NXC5 875 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 GDE1Q9NZC3 331 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 GIT1Q9Y2X7 761 aa9.38□□□□□ -0.91
CTNNA1-215ENST00000519309 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 ERLIN2O94905 339 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 PAPSS2O95340 614 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 RFC5P40937 340 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 CCR3P51677 355 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 PSMC5P62195 406 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 EXOSC10Q01780 885 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 LAMTOR4Q0VGL1 99 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 COL9A2Q14055 689 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 PABPC1LQ4VXU2 614 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 PLA2G4FQ68DD2 849 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 MOXD1Q6UVY6 613 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 PRSS55Q6UWB4 352 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 EXOC8Q8IYI6 725 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 CCDC136Q96JN2 1154 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 CLSTN3Q9BQT9 956 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 TTPALQ9BTX7 342 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 CSRNP2Q9H175 543 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 HEBP1Q9NRV9 189 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 HES2Q9Y543 173 aa9.37□□□□□ -0.91
CTNNA1-215ENST00000519309 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 EML5Q05BV3 1969 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 CYP3A7-CYP3A51PA0A087WV96 503 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 KLF18A0A0U1RQI7 1052 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 MAN2B1O00754 1011 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 CCL16O15467 120 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 FCARP24071 287 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 CYP3A7P24462 503 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 CNR2P34972 360 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 HSP90AA2PQ14568 343 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 PSMD5Q16401 504 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 LPAL2Q16609 132 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 AMHR2Q16671 573 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 UVSSAQ2YD98 709 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 FERMT3Q86UX7 667 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 HACE1Q8IYU2 909 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 RNF149Q8NC42 400 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 LNX1Q8TBB1 728 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 SLC7A14Q8TBB6 771 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 TCP11Q8WWU5 503 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 PRPF31Q8WWY3 499 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 GJA10Q969M2 543 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 ELSPBP1Q96BH3 223 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 NXF3Q9H4D5 531 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 TRPV5Q9NQA5 729 aa9.36□□□□□ -0.91
CTNNA1-215ENST00000519309 CCDC196A0A1B0GTZ2 297 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 TM4SF5O14894 197 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 ASAP2O43150 1006 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 GDF9O60383 454 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 DKC1O60832 514 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 KIF4AO95239 1232 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 TDP2O95551 362 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 PROS1P07225 676 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 NPEPPSP55786 919 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 PTENP60484 403 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 POU5F1BQ06416 359 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 ELAVL2Q12926 359 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 PPP2R5CQ13362 524 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 TUSC3Q13454 348 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 RAB33AQ14088 237 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 EMC2Q15006 297 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 ACAP1Q15027 740 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 SLC5A9Q2M3M2 681 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 PRR23BQ6ZRT6 265 aa9.35□□□□□ -0.91
CTNNA1-215ENST00000519309 DHX32Q7L7V1 743 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms