RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KLHL35Q6PF15 583 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 CCDC137Q6PK04 289 aaKnown RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 PTF1AQ7RTS3 328 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 DENND1AQ8TEH3 1009 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 NACAP1Q9BZK3 213 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 TAOK3Q9H2K8 898 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 HTR3EA5X5Y0 456 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 BIRC5O15392 142 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 CSF1RP07333 972 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 CALML3P27482 149 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 SMARCA1P28370 1054 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 CHKAP35790 457 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 PSMD7P51665 324 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 KYNUQ16719 465 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 DYMQ7RTS9 669 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 PALB2Q86YC2 1186 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 VPS52Q8N1B4 723 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 SLC35G2Q8TBE7 412 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 FNDC8Q8TC99 324 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 PRICKLE1Q96MT3 831 aaPredicted RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 CCDC85AQ96PX6 553 aaPredicted RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 R3HDM2Q9Y2K5 976 aaKnown RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 BAZ2BQ9UIF8 2168 aaKnown RBP14.44□□□□□ -0.1
PABPC1-208ENST00000519004 KIF13BQ9NQT8 1826 aa14.44□□□□□ -0.1
PABPC1-208ENST00000519004 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 TRAF5O00463 557 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 LAD1O00515 517 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 BUD23O43709 281 aaKnown RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 TTC4O95801 387 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 SMIM18P0DKX4 95 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 CALM1P0DP23 149 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 CALM2P0DP24 149 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 CALM3P0DP25 149 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 ANXA13P27216 316 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 POLD1P28340 1107 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 PHKA1P46020 1223 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 PDK4Q16654 411 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 INF2Q27J81 1249 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 EAPPQ56P03 285 aaPredicted RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 RBM44Q6ZP01 1051 aaKnown RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 TRIM67Q6ZTA4 783 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 OTOAQ7RTW8 1153 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 TMEM110Q86TL2 294 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 HSPBAP1Q96EW2 488 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 MPHOSPH6Q99547 160 aaKnown RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 BLOC1S4Q9NUP1 217 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 ZDHHC7Q9NXF8 308 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 EURLQ9NYK6 297 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 TAS2R1Q9NYW7 299 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 PCDHA4Q9UN74 947 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 KIF1AQ12756 1690 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 DDAH1O94760 285 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 MARSP56192 900 aaKnown RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 CLUL1Q15846 466 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
PABPC1-208ENST00000519004 LRRC8BQ6P9F7 803 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 KLHDC10Q6PID8 442 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 RFX8Q6ZV50 586 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 C3orf67Q6ZVT6 689 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 SV2BQ7L1I2 683 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 PHLDB2Q86SQ0 1253 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 TREML1Q86YW5 311 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 ZBED8Q8IZ13 594 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 OLIG1Q8TAK6 271 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 NSL1Q96IY1 281 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 SPZ1Q9BXG8 430 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 ZNF148Q9UQR1 794 aa14.43□□□□□ -0.1
PABPC1-208ENST00000519004 CCDC194A0A1B0GVG4 234 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 F8W8V4 182 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 SPAG7O75391 227 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 USP1O94782 785 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 HAUS5O94927 633 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 UCHL3P15374 230 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 HSPA6P17066 643 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 GNAT2P19087 354 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 RAP1GDS1P52306 607 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 ARFIP2P53365 341 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 METTL24Q5JXM2 366 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 ZNF362Q5T0B9 420 aaPredicted RBP14.42□□□□□ -0.1
PABPC1-208ENST00000519004 RHBDF2Q6PJF5 856 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 RAPH1Q70E73 1250 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 PDSS2Q86YH6 399 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 ANKRD35Q8N283 1001 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 RFFLQ8WZ73 363 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 NDE1Q9NXR1 346 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 ARPP21Q9UBL0 812 aaPredicted RBP14.42□□□□□ -0.1
PABPC1-208ENST00000519004 PTPN22Q9Y2R2 807 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 CFAP69A5D8W1 941 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 WDR46O15213 610 aaKnown RBP14.42□□□□□ -0.1
PABPC1-208ENST00000519004 STRNO43815 780 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 CDH16O75309 829 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 PGM3O95394 542 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 FGFR1P11362 822 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 SLC9A1P19634 815 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms