RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 MCCP23508 829 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 ADKP55263 362 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 PTH1RQ03431 593 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 SAFBQ15424 915 aaKnown RBP eCLIP5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 RALGPS1Q5JS13 557 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 B3GNT9Q6UX72 402 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 CATIPQ7Z7H3 387 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 PHYKPLQ8IUZ5 450 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 TRIM48Q8IWZ4 208 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 STK11IPQ8N1F8 1099 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 ZGPATQ8N5A5 531 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 NETO2Q8NC67 525 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 CCDC191Q8NCU4 936 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 EVI5LQ96CN4 794 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 EDC3Q96F86 508 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 FAM227BQ96M60 508 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 RNF38Q9H0F5 515 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 SEMA4AQ9H3S1 761 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 POFUT1Q9H488 388 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 MAN1C1Q9NR34 630 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 DIAPH3Q9NSV4 1193 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 LMCD1Q9NZU5 365 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 ACSL6Q9UKU0 697 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 ZBTB1Q9Y2K1 713 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 SNX14Q9Y5W7 946 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 SPATA31A5Q5VU36 1347 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 MAP3K15Q6ZN16 1313 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 SPATA31A7Q8IWB4 1347 aa5.62□□□□□ -1.51
CTNNA1-212ENST00000518919 ANO9A1A5B4 782 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 PRR19A6NJB7 356 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 NRDCO43847 1150 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 NDUFS2O75306 463 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 PCCAP05165 728 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 HK2P52789 917 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 SLC5A3P53794 718 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 ZP2Q05996 745 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 CUL4AQ13619 759 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 MOGSQ13724 837 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 PKP1Q13835 747 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 GALEQ14376 348 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 KIR3DS1Q14943 382 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 HLFQ16534 295 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 UAP1L1Q3KQV9 507 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 ZBTB41Q5SVQ8 909 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 LILRA6Q6PI73 481 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 CCDC171Q6TFL3 1326 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 CWC27Q6UX04 472 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 KIF6Q6ZMV9 814 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 CLEC17AQ6ZS10 378 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 MARCH10Q8NA82 808 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 HIPK4Q8NE63 616 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 SLC35G2Q8TBE7 412 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 E2F7Q96AV8 911 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 RAX2Q96IS3 184 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 TMX3Q96JJ7 454 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 TTC14Q96N46 770 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 GBP4Q96PP9 640 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 SLC2A13Q96QE2 648 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 MAP3K14Q99558 947 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 ARPC5LQ9BPX5 153 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 PLCD4Q9BRC7 762 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 RPAP1Q9BWH6 1393 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 TEX13AQ9BXU3 409 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 GTPBP4Q9BZE4 634 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 UPF3BQ9BZI7 483 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 BOLA2Q9H3K6 86 aa5.61□□□□□ -1.51
CTNNA1-212ENST00000518919 ANKRD36CQ5JPF3 1778 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 PALLDQ8WX93 1383 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 UBN2Q6ZU65 1347 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 CDHR2Q9BYE9 1310 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 EYA2O00167 538 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 EXOC5O00471 708 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 PMM2O15305 246 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 DTNBO60941 627 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 CIAO1O76071 339 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 APOL3O95236 402 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 STARD3NLO95772 234 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 CHGBP05060 677 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 LPLP06858 475 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 HSP90AA1P07900 732 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 GLI4P10075 376 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 MYBP10242 640 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 ATP5JP18859 108 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 HOXA10P31260 410 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 HERVK_113P62684 666 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 MRPS9P82933 396 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 GRIN1Q05586 938 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 BNIP3Q12983 259 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 LRRC24Q50LG9 513 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 PITRM1Q5JRX3 1037 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 TTC38Q5R3I4 469 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 C10orf62Q5T681 223 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 PRAMEF9Q5VWM5 478 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 MBNL2Q5VZF2 373 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 TIGD7Q6NT04 549 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 ZNF589Q86UQ0 364 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 SPPL2CQ8IUH8 684 aa5.6□□□□□ -1.51
CTNNA1-212ENST00000518919 GRAMD1CQ8IYS0 662 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms