RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ODF2LQ9ULJ1 636 aa14.62□□□□□ -0.07
VEGFA-219ENST00000518824 FAN1Q9Y2M0 1017 aa14.62□□□□□ -0.07
VEGFA-219ENST00000518824 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
VEGFA-219ENST00000518824 YEATS4O95619 227 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 CXCL14O95715 111 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 EFEMP2O95967 443 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 ALDH2P05091 517 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 KRT18P05783 430 aaKnown RBP14.61□□□□□ -0.07
VEGFA-219ENST00000518824 KCNC3Q14003 757 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 DCAF4L1Q3SXM0 396 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 ZNF568Q3ZCX4 644 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 ZC2HC1CQ53FD0 456 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-219ENST00000518824 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 HAUS6Q7Z4H7 955 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 EFHBQ8N7U6 833 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 MRPL43Q8N983 215 aaKnown RBP14.61□□□□□ -0.07
VEGFA-219ENST00000518824 DDX12PQ92771 950 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 DNAJC19Q96DA6 116 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 MSLNLQ96KJ4 702 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 B3GALT6Q96L58 329 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 ADPGKQ9BRR6 497 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 FGFBP2Q9BYJ0 223 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 CD320Q9NPF0 282 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 STK17AQ9UEE5 414 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 CCDC39Q9UFE4 941 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 PUF60Q9UHX1 559 aaKnown RBP14.61□□□□□ -0.07
VEGFA-219ENST00000518824 CDH22Q9UJ99 828 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 PCDHA7Q9UN72 937 aa14.61□□□□□ -0.07
VEGFA-219ENST00000518824 TCHHQ07283 1943 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 GRXCR2A6NFK2 248 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 CASTOR2A6NHX0 329 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 TISP43B9A030 160 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 CTSAP10619 480 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 CA8P35219 290 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 STAT6P42226 847 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 GRIK3Q13003 919 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 E2F4Q16254 413 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 ZBTB41Q5SVQ8 909 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 PTCRAQ6ISU1 281 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-219ENST00000518824 SLC39A4Q6P5W5 647 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 SFR1Q86XK3 245 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 HACE1Q8IYU2 909 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 HASPINQ8TF76 798 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 RSPH1Q8WYR4 309 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 ZMAT2Q96NC0 199 aaKnown RBP14.6□□□□□ -0.07
VEGFA-219ENST00000518824 RPS6KC1Q96S38 1066 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 UHRF1Q96T88 793 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-219ENST00000518824 GPR62Q9BZJ7 368 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 PARVGQ9HBI0 331 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 GOLGA2P5Q9HBQ8 144 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 LARSQ9P2J5 1176 aaKnown RBP14.6□□□□□ -0.07
VEGFA-219ENST00000518824 ANKFY1Q9P2R3 1169 aa14.6□□□□□ -0.07
VEGFA-219ENST00000518824 K7ENM7 598 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 TRAK2O60296 914 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 CUTAO60888 179 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 LILRB3O75022 631 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 CLASP2O75122 1294 aaKnown RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 GRM5P41594 1212 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 NDUFV1P49821 464 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 SMTNP53814 917 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 SOX4Q06945 474 aaPredicted RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 SMC1AQ14683 1233 aaKnown RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 PTPN14Q15678 1187 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 AAK1Q2M2I8 961 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 PDE12Q6L8Q7 609 aaKnown RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 KANK3Q6NY19 840 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 MPZL3Q6UWV2 235 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 SV2BQ7L1I2 683 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 RNF168Q8IYW5 571 aaPredicted RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 PPP1R10Q96QC0 940 aaKnown RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 APOL5Q9BWW9 433 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 NGRNQ9NPE2 291 aaKnown RBP14.59□□□□□ -0.07
VEGFA-219ENST00000518824 TBC1D7Q9P0N9 293 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 TBX20Q9UMR3 447 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 CITO14578 2027 aa14.59□□□□□ -0.07
VEGFA-219ENST00000518824 TTC28Q96AY4 2481 aa14.58□□□□□ -0.07
VEGFA-219ENST00000518824 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.58□□□□□ -0.08
VEGFA-219ENST00000518824 ANKRD63C9JTQ0 380 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 C2CD2LO14523 706 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 MBTPS2O43462 519 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 TBCAO75347 108 aaKnown RBP14.58□□□□□ -0.08
VEGFA-219ENST00000518824 THP07101 528 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 MCF2P10911 925 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 CASP1P29466 404 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 TXLNAP40222 546 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 TNFSF9P41273 254 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 KCNA1Q09470 495 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 STRN3Q13033 797 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 CD300LGQ6UXG3 332 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 ALKAL1Q6UXT8 129 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 FAM178BQ8IXR5 827 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 GLIS3Q8NEA6 775 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 KHSRPQ92945 711 aaKnown RBP eCLIP14.58□□□□□ -0.081e-9■■■□□ 15.1
VEGFA-219ENST00000518824 HPS3Q969F9 1004 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 DHX58Q96C10 678 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 TCHPQ9BT92 498 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 RCOR1Q9UKL0 485 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 HCFC2Q9Y5Z7 792 aa14.58□□□□□ -0.08
VEGFA-219ENST00000518824 PDCD11Q14690 1871 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms