RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RC3H2Q9HBD1 1191 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 RWDD3Q9Y3V2 267 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 ASB1Q9Y576 335 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA9Q9Y5G4 932 aaKnown RBP5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA8Q9Y5G5 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA7Q9Y5G6 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA6Q9Y5G7 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA3Q9Y5H0 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHGA2Q9Y5H1 932 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 CHD6Q8TD26 2715 aa5.76□□□□□ -1.49
HMGB1P23-201ENST00000518743 SOS1Q07889 1333 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 WASH4PA8MWX3 477 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 SMIM22K7EJ46 135 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 AP1G1O43747 822 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 H2AFYO75367 372 aaKnown RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 RAD17O75943 681 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 FOSP01100 380 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 HRGP04196 525 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 PTX3P26022 381 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 ARL4AP40617 200 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 IL12RB1P42701 662 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 MTNR1BP49286 362 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CXCL9Q07325 125 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CRHR2Q13324 411 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 IKZF1Q13422 519 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 DHX8Q14562 1220 aaKnown RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 ODF1Q14990 250 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 TNIP1Q15025 636 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 AOC3Q16853 763 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 TTC38Q5R3I4 469 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 ATAT1Q5SQI0 421 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CPZQ66K79 652 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZPBP2Q6X784 338 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CEP128Q6ZU80 1094 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 UBE2Q1Q7Z7E8 422 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CXorf67Q86X51 503 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 ENAHQ8N8S7 591 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 TTLL11Q8NHH1 800 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 SH3RF2Q8TEC5 729 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 AUTS2Q8WXX7 1259 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 JADE3Q92613 823 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 C1GALT1C1Q96EU7 318 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 PAWRQ96IZ0 340 aaKnown RBP5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 JMJD8Q96S16 334 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 RIC8BQ9NVN3 520 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 GGA3Q9NZ52 723 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 MYOTQ9UBF9 498 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 ACSL6Q9UKU0 697 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 PCDHB4Q9Y5E5 795 aa5.75□□□□□ -1.49
HMGB1P23-201ENST00000518743 CENPJQ9HC77 1338 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 GPR179Q6PRD1 2367 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 TJP1Q07157 1748 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZNF646O15015 1829 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 UBA6A0AVT1 1052 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 FITM1A5D6W6 292 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 PRAMEF25A6NGN4 478 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 FAM227AF5H4B4 570 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 TCERG1O14776 1098 aaKnown RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 TADA3O75528 432 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZBED1O96006 694 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 TFRCP02786 760 aaKnown RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 RPLP2P05387 115 aaKnown RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 GJB1P08034 283 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 CCL5P13501 91 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 FSTP19883 344 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ITGB8P26012 769 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 GRM3Q14832 879 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 PDCD1Q15116 288 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 HSF5Q4G112 596 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 MBNL2Q5VZF2 373 aaKnown RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 OTUD7BQ6GQQ9 843 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ESRP1Q6NXG1 681 aaKnown RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 IFNL2Q8IZJ0 200 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ACRBPQ8NEB7 543 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 PDZD8Q8NEN9 1154 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 PEX11GQ96HA9 241 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ALPK1Q96QP1 1244 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 TAAR9Q96RI9 348 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 STRBPQ96SI9 672 aaKnown RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 SELENOOQ9BVL4 669 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 CD244Q9BZW8 370 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ANLNQ9NQW6 1124 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 ASH2LQ9UBL3 628 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 TMEM59LQ9UK28 342 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 NUMBLQ9Y6R0 609 aa5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 KMT2BQ9UMN6 2715 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P23-201ENST00000518743 KCNK3O14649 394 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 NRDCO43847 1150 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZRANB2O95218 330 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 POU2F2P09086 479 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ALDH1B1P30837 517 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 AK2P54819 239 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 MANFP55145 182 aaKnown RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZNF280AP59817 542 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 FAM193AP78312 1265 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ROM1Q03395 351 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 TUSC3Q13454 348 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 MOGSQ13724 837 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 SPIDRQ14159 915 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms