RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TTC7BQ86TV6 843 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 ANKRD35Q8N283 1001 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 Q8TCH9 128 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 EDAQ92838 391 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 FAM89AQ96GI7 184 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 SENP6Q9GZR1 1112 aaPredicted RBP4.82□□□□□ -1.64
VPS13B-207ENST00000518569 CD248Q9HCU0 757 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 TMEM140Q9NV12 185 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 CLCA2Q9UQC9 943 aa4.82□□□□□ -1.64
VPS13B-207ENST00000518569 ATRNL1Q5VV63 1379 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 B5MCH6 92 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 K7ESM1 405 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 PJA2O43164 708 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 MFAP3LO75121 409 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 IPO13O94829 963 aaKnown RBP4.81□□□□□ -1.64
VPS13B-207ENST00000518569 ALOX15P16050 662 aaPredicted RBP4.81□□□□□ -1.64
VPS13B-207ENST00000518569 HSPA6P17066 643 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 PTPN7P35236 360 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 HHEXQ03014 270 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 PTH1RQ03431 593 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 ICAM4Q14773 271 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 LRRC41Q15345 812 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 C3orf36Q3SXR2 165 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 THEMIS2Q5TEJ8 643 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 MAMDC4Q6UXC1 1216 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 Q6ZSN1 163 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 GPRIN1Q7Z2K8 1008 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 FAM83AQ86UY5 434 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 TPH2Q8IWU9 490 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 RHOT1Q8IXI2 618 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 D2HGDHQ8N465 521 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 MDM1Q8TC05 714 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 HPS3Q969F9 1004 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 MIEF2Q96C03 454 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 TMEM176AQ96HP8 235 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 GTPBP4Q9BZE4 634 aaKnown RBP4.81□□□□□ -1.64
VPS13B-207ENST00000518569 NMRK2Q9NPI5 230 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 TDP1Q9NUW8 608 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 CALCOCO1Q9P1Z2 691 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 SH3BP1Q9Y3L3 701 aa4.81□□□□□ -1.64
VPS13B-207ENST00000518569 ZMYM3Q14202 1370 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MYBBP1AQ9BQG0 1328 aaKnown RBP4.8□□□□□ -1.64
VPS13B-207ENST00000518569 SLC16A6O15403 523 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 CYP27B1O15528 508 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 OFD1O75665 1012 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 PARNO95453 639 aaKnown RBP4.8□□□□□ -1.64
VPS13B-207ENST00000518569 AMY1AP04745 511 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 ADRB1P08588 477 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 GNAT2P19087 354 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 LPOP22079 712 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-207ENST00000518569 ATP8B2P98198 1209 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 IL10RAQ13651 578 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 RAB39AQ14964 217 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 DCAF17Q5H9S7 520 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MFSD14BQ5SR56 506 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 OTUD7BQ6GQQ9 843 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 EPM2AIP1Q7L775 607 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-207ENST00000518569 FMNL3Q8IVF7 1028 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MYO1HQ8N1T3 1032 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 REPS2Q8NFH8 660 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MDGA1Q8NFP4 955 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 CCHCR1Q8TD31 782 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 NSUN6Q8TEA1 469 aaKnown RBP4.8□□□□□ -1.64
VPS13B-207ENST00000518569 ST8SIA2Q92186 375 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MVB12AQ96EY5 273 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 CEP95Q96GE4 821 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 LOXL4Q96JB6 756 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 MRGPRX4Q96LA9 322 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 WWC2-AS2Q96NR7 200 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 KCNH6Q9H252 994 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 SLC12A5Q9H2X9 1139 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 FAM30AQ9NZY2 134 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 TCAF1Q9Y4C2 921 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 PCDHA13Q9Y5I0 950 aa4.8□□□□□ -1.64
VPS13B-207ENST00000518569 GOLGA6CA6NDK9 693 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 GOLGA6BA6NDN3 693 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 TBKBP1A7MCY6 615 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 GPR32O75388 356 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 STC2O76061 302 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 ARIH2O95376 493 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 SNRPA1P09661 255 aaKnown RBP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 GOLGA6DP0CG33 693 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 DDCP20711 480 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 SELENOPP49908 381 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 DSC2Q02487 901 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 TARDBPQ13148 414 aaKnown RBP eCLIP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 MTM1Q13496 603 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 MLC1Q15049 377 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 ELAVL1Q15717 326 aaKnown RBP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 BMT2Q1RMZ1 405 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 MINDY4Q4G0A6 757 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 IFIT1BQ5T764 474 aaKnown RBP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 DRICH1Q6PGQ1 229 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 B3GNT9Q6UX72 402 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 RSPH3Q86UC2 560 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 SGMS1Q86VZ5 419 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 DRC7Q8IY82 874 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms