RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 GOLGA6L10A0A0M3HER8 536 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 DDX3XO00571 662 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 CES2O00748 559 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 STBD1O95210 358 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 KIF4AO95239 1232 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 TFRCP02786 760 aaKnown RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 PGK2P07205 417 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 MARK3P27448 753 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 SLC26A2P50443 739 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 GALCP54803 685 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 VSNL1P62760 191 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 SP2Q02086 613 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 GABPB1Q06547 395 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 MXD4Q14582 209 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 GLE1Q53GS7 698 aaKnown RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 MEI1Q5TIA1 1274 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 IER5Q5VY09 327 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 FBXO46Q6PJ61 603 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 ZNF572Q7Z3I7 529 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 FBXO16Q8IX29 292 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 TPCN2Q8NHX9 752 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 LNX1Q8TBB1 728 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 ASAP3Q8TDY4 903 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 COG1Q8WTW3 980 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 SCFD2Q8WU76 684 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 NAP1L3Q99457 506 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-204ENST00000517824 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 TLR10Q9BXR5 811 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 SMARCAD1Q9H4L7 1026 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 ZNF446Q9NWS9 450 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 CTTNBP2NLQ9P2B4 639 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 ADGRA3Q8IWK6 1321 aa11.6□□□□□ -0.55
SPIDR-204ENST00000517824 GSTTP1A0A1W2PQM5 241 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 UNCXA6NJT0 531 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 PGRMC1O00264 195 aaKnown RBP11.59□□□□□ -0.55
SPIDR-204ENST00000517824 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-204ENST00000517824 CEP104O60308 925 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 FKTNO75072 461 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 CNMDO75829 334 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 ZRANB2O95218 330 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPIDR-204ENST00000517824 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
SPIDR-204ENST00000517824 GLRA2P23416 452 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 GPC3P51654 580 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 GTF2A2P52657 109 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 BPIFB4P59827 614 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 PSMD6Q15008 389 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 SURF1Q15526 300 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 LY6KQ17RY6 165 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
SPIDR-204ENST00000517824 TAF3Q5VWG9 929 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 CREG2Q8IUH2 290 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 IFT20Q8IY31 132 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 UBL4BQ8N7F7 174 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 SPATA4Q8NEY3 305 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 ATP8B4Q8TF62 1192 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 TRIM11Q96F44 468 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 RUFY1Q96T51 708 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 TMEM134Q9H6X4 195 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 SUGCTQ9HAC7 445 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.559e-7■■■■■ 267.3
SPIDR-204ENST00000517824 PDLIM7Q9NR12 457 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 RAB20Q9NX57 234 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 PCDH10Q9P2E7 1040 aa11.59□□□□□ -0.55
SPIDR-204ENST00000517824 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 CCL15-CCL14A0A0B4J2E2 113 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 TMEM110-MUSTN1A8MSY1 372 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 ADCY3O60266 1144 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 PEX10O60683 326 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 RTN2O75298 545 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 MAFO75444 373 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-204ENST00000517824 PIGRP01833 764 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 PRKCBP05771 671 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 ADSSP30520 456 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 ARL2P36404 184 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-204ENST00000517824 AP3M2P53677 418 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 PAK2Q13177 524 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 MAPK6Q16659 721 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 CCL15Q16663 113 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 PPP1R2P3Q6NXS1 205 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 PLPPR4Q7Z2D5 763 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
SPIDR-204ENST00000517824 SCLT1Q96NL6 688 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms