RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 TUSC3Q13454 348 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 MCM6Q14566 821 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 PTPN14Q15678 1187 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 NAB2Q15742 525 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 XKR4Q5GH76 650 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 ZPBP2Q6X784 338 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 LINC00301Q8NCQ3 95 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 RASSF8Q8NHQ8 419 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 ZNF396Q96N95 335 aaPredicted RBP27.04■■□□□ 1.92
PVT1-204ENST00000517525 HERC2P3Q9BVR0 1158 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 TARS2Q9BW92 718 aaKnown RBP27.04■■□□□ 1.92
PVT1-204ENST00000517525 CDT1Q9H211 546 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 BARX2Q9UMQ3 279 aaPredicted RBP27.04■■□□□ 1.92
PVT1-204ENST00000517525 NPHP3-ACAD11A0A0J9YXS1 232 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 C19orf67A6NJJ6 358 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 THP07101 528 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 HSP90AA1P07900 732 aaKnown RBP27.03■■□□□ 1.92
PVT1-204ENST00000517525 CASP10Q92851 521 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 CLIC6Q96NY7 704 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 PARVGQ9HBI0 331 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 SSX2IPQ9Y2D8 614 aa27.03■■□□□ 1.92
PVT1-204ENST00000517525 PRG3Q9Y2Y8 225 aaPredicted RBP27.03■■□□□ 1.92
PVT1-204ENST00000517525 PPP6R2O75170 966 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 TOM1L1O75674 476 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 ZSCAN22P10073 491 aaPredicted RBP27.02■■□□□ 1.92
PVT1-204ENST00000517525 ABCD1P33897 745 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 TXLNAP40222 546 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 CEBPZQ03701 1054 aaKnown RBP27.02■■□□□ 1.92
PVT1-204ENST00000517525 STRN3Q13033 797 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 ANKRD54Q6NXT1 300 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 MPZL3Q6UWV2 235 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 ALKAL1Q6UXT8 129 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 ADHFE1Q8IWW8 467 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 S1PR5Q9H228 398 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 CHST7Q9NS84 486 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 HCFC2Q9Y5Z7 792 aa27.02■■□□□ 1.92
PVT1-204ENST00000517525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.01■■□□□ 1.91
PVT1-204ENST00000517525 YEATS4O95619 227 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 RBM10P98175 930 aaKnown RBP27.01■■□□□ 1.91
PVT1-204ENST00000517525 ZP2Q05996 745 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 ZNF568Q3ZCX4 644 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 SPECC1Q5M775 1068 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 HAUS6Q7Z4H7 955 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 PPFIBP1Q86W92 1011 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 GJD3Q8N144 294 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 SLC22A17Q8WUG5 538 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 SUSD6Q92537 303 aa27.01■■□□□ 1.91
PVT1-204ENST00000517525 FAM13AO94988 1023 aa27■■□□□ 1.91
PVT1-204ENST00000517525 C1RP00736 705 aa27■■□□□ 1.91
PVT1-204ENST00000517525 STK38Q15208 465 aa27■■□□□ 1.91
PVT1-204ENST00000517525 CLUL1Q15846 466 aa27■■□□□ 1.91
PVT1-204ENST00000517525 KIAA0319Q5VV43 1072 aa27■■□□□ 1.91
PVT1-204ENST00000517525 RRAGBQ5VZM2 374 aa27■■□□□ 1.91
PVT1-204ENST00000517525 ATL3Q6DD88 541 aa27■■□□□ 1.91
PVT1-204ENST00000517525 SYCE2Q6PIF2 218 aa27■■□□□ 1.91
PVT1-204ENST00000517525 CCDC73Q6ZRK6 1079 aa27■■□□□ 1.91
PVT1-204ENST00000517525 AUTS2Q8WXX7 1259 aa27■■□□□ 1.91
PVT1-204ENST00000517525 PPP1R10Q96QC0 940 aaKnown RBP27■■□□□ 1.91
PVT1-204ENST00000517525 FIZ1Q96SL8 496 aa27■■□□□ 1.91
PVT1-204ENST00000517525 CCDC94Q9BW85 323 aaPredicted RBP27■■□□□ 1.91
PVT1-204ENST00000517525 RXFP1Q9HBX9 757 aa27■■□□□ 1.91
PVT1-204ENST00000517525 CD320Q9NPF0 282 aa27■■□□□ 1.91
PVT1-204ENST00000517525 MRPL17Q9NRX2 175 aaKnown RBP27■■□□□ 1.91
PVT1-204ENST00000517525 TOPORSQ9NS56 1045 aaPredicted RBP27■■□□□ 1.91
PVT1-204ENST00000517525 ADAM28Q9UKQ2 775 aa27■■□□□ 1.91
PVT1-204ENST00000517525 GDAQ9Y2T3 454 aa27■■□□□ 1.91
PVT1-204ENST00000517525 MUC3AQ02505 3323 aa27■■□□□ 1.91
PVT1-204ENST00000517525 SPTLC2O15270 562 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 PIGRP01833 764 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 DSG1Q02413 1049 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 CACNB1Q02641 598 aaPredicted RBP26.99■■□□□ 1.91
PVT1-204ENST00000517525 MCL1Q07820 350 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 HSP90AA2PQ14568 343 aaPredicted RBP26.99■■□□□ 1.91
PVT1-204ENST00000517525 KLHL5Q96PQ7 755 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 POP1Q99575 1024 aaKnown RBP26.99■■□□□ 1.91
PVT1-204ENST00000517525 EMILIN2Q9BXX0 1053 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 CXCL16Q9H2A7 254 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 ST6GALNAC4Q9H4F1 302 aa26.99■■□□□ 1.91
PVT1-204ENST00000517525 TRAK2O60296 914 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 F13A1P00488 732 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 URODP06132 367 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 DHX8Q14562 1220 aaKnown RBP26.98■■□□□ 1.91
PVT1-204ENST00000517525 TPRNQ4KMQ1 711 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 FUT10Q6P4F1 479 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 MYCT1Q8N699 235 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 TCHPQ9BT92 498 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 DZANK1Q9NVP4 752 aa26.98■■□□□ 1.91
PVT1-204ENST00000517525 USP15Q9Y4E8 981 aaPredicted RBP26.98■■□□□ 1.91
PVT1-204ENST00000517525 TDRD15B5MCY1 1934 aaKnown RBP26.98■■□□□ 1.91
PVT1-204ENST00000517525 TMEM189-UBE2V1I3L0A0 370 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 KRT18P05783 430 aaKnown RBP26.97■■□□□ 1.91
PVT1-204ENST00000517525 KCNE1P15382 129 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 GLUD2P49448 558 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 YARSP54577 528 aaKnown RBP26.97■■□□□ 1.91
PVT1-204ENST00000517525 GTF2BQ00403 316 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 TAS1R1Q7RTX1 841 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 CEP120Q8N960 986 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 TMEM87AQ8NBN3 555 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 ACAP3Q96P50 834 aa26.97■■□□□ 1.91
PVT1-204ENST00000517525 TBX20Q9UMR3 447 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms