RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 CYP4A11Q02928 519 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 KRT17Q04695 432 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 USP17L24Q0WX57 530 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SPARCL1Q14515 664 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SLC29A2Q14542 456 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ZNF268Q14587 947 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MTFR1Q15390 333 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CNGA2Q16280 664 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CCNG2Q16589 344 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ECM1Q16610 540 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PARP6Q2NL67 630 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 KLHL38Q2WGJ6 581 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NBPF20Q3BBV1 942 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 USH1GQ495M9 461 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 EPC2Q52LR7 807 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 BRDTQ58F21 947 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ZC3H12AQ5D1E8 599 aaKnown RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TNFAIP8L3Q5GJ75 292 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 C6orf163Q5TEZ5 329 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LRRC38Q5VT99 294 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FKBP1CQ5VVH2 108 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SLFN12LQ6IEE8 588 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ACAD10Q6JQN1 1059 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 HIBCHQ6NVY1 386 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CDC42EP5Q6NZY7 148 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 DRICH1Q6PGQ1 229 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 USP17L6PQ6QN14 398 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RGS9BPQ6ZS82 235 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 OTOP1Q7RTM1 612 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MIER3Q7Z3K6 550 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TDRPQ86YL5 185 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TPH2Q8IWU9 490 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TRIM42Q8IWZ5 723 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RHOT1Q8IXI2 618 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 C4orf19Q8IY42 314 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 EXOC8Q8IYI6 725 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FAM71AQ8IYT1 594 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NLGN1Q8N2Q7 840 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PPM1KQ8N3J5 372 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MAB21L3Q8N8X9 362 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 GPATCH11Q8N954 259 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SMC1BQ8NDV3 1235 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FBXL13Q8NEE6 735 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MCPH1Q8NEM0 835 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LNX1Q8TBB1 728 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 EPS8L1Q8TE68 723 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ATP8B4Q8TF62 1192 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TCP11Q8WWU5 503 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SHC3Q92529 594 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LPAR1Q92633 364 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 KCNN1Q92952 543 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ARHGEF2Q92974 986 aaKnown RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ATP6V0A1Q93050 837 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 KLHL29Q96CT2 875 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MASTLQ96GX5 879 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TMEM237Q96Q45 408 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LRRC37BQ96QE4 947 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SMC6Q96SB8 1091 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LXNQ9BS40 222 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TRIM51Q9BSJ1 452 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RUSC1Q9BVN2 902 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NUP85Q9BW27 656 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 OSBPL7Q9BZF2 842 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TRIM31Q9BZY9 425 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 TRIM6Q9C030 488 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 MIS12Q9H081 205 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RANBP17Q9H2T7 1088 aaKnown RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 VCXQ9H320 206 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 CPVLQ9H3G5 476 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FAM96AQ9H5X1 160 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 FAM124BQ9H5Z6 455 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 AZI2Q9H6S1 392 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 EBF2Q9HAK2 575 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NOD2Q9HC29 1040 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 UBE2TQ9NPD8 197 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 OSGEPQ9NPF4 335 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ANKEF1Q9NU02 776 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 DDX56Q9NY93 547 aaKnown RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SMARCAL1Q9NZC9 954 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 GRHL1Q9NZI5 618 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PPP1R1BQ9UD71 204 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SRP68Q9UHB9 627 aaKnown RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 BAIAP2L1Q9UHR4 511 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SLC24A2Q9UI40 661 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 STRIP2Q9ULQ0 834 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 SHOC2Q9UQ13 582 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 JAG2Q9Y219 1238 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 EFR3BQ9Y2G0 817 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 STARD13Q9Y3M8 1113 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PPME1Q9Y570 386 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 PCDHB2Q9Y5E7 798 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 USH1CQ9Y6N9 552 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 COL11A2P13942 1736 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 EMSYQ7Z589 1322 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RPTORQ8N122 1335 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 IGSF9BQ9UPX0 1349 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 ADAMTSL1Q8N6G6 1762 aa3.6□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 LTBP4Q8N2S1 1624 aa3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.59□□□□□ -1.83
RNU4ATAC3P-201ENST00000516699 NPHP3-ACAD11A0A0J9YXS1 232 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms