RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PCSK9Q8NBP7 692 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SLAIN1Q8ND83 568 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KLHDC9Q8NEP7 349 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DNAJB3Q8WWF6 145 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 POP1Q99575 1024 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DESI2Q9BSY9 194 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMEM117Q9H0C3 514 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMEM8AQ9HCN3 771 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PTPRHQ9HD43 1115 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TOPORSQ9NS56 1045 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HDAC6Q9UBN7 1215 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DDX20Q9UHI6 824 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PPP2R2CQ9Y2T4 447 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FHOD1Q9Y613 1164 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RALGAPA2Q2PPJ7 1873 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FAM189A1O60320 539 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TSPAN1O60635 241 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CSDE1O75534 798 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NDUFA10O95299 355 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 INHAP05111 366 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SERPING1P05155 500 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ASGR1P07306 291 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 IQCF3P0C7M6 154 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MCF2P10911 925 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CST5P28325 142 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HOXC8P31273 242 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZNF200P98182 395 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HIC1Q14526 733 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PCBP1Q15365 356 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KCNA10Q16322 511 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 AMHR2Q16671 573 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KYAT1Q16773 422 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FAM47CQ5HY64 1035 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZBTB41Q5SVQ8 909 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EEF1DP3Q658K8 133 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GJB7Q6PEY0 223 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 APBB1IPQ7Z5R6 666 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RNF180Q86T96 592 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FMNL3Q8IVF7 1028 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 THNSL1Q8IYQ7 743 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NME8Q8N427 588 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FBXL13Q8NEE6 735 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LMO3Q8TAP4 145 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CCDC42Q96M95 316 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 C16orf45Q96MC5 204 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CGRRF1Q99675 332 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ADPGKQ9BRR6 497 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CDT1Q9H211 546 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ADAMTS10Q9H324 1103 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 DEF6Q9H4E7 631 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PDZD7Q9H5P4 517 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NHEJ1Q9H9Q4 299 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PDE11AQ9HCR9 933 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 AIPL1Q9NZN9 384 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARHGAP20Q9P2F6 1191 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GTF2IRD1Q9UHL9 959 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 DNAJC12Q9UKB3 198 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CPSF3Q9UKF6 684 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GINS2Q9Y248 185 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ADGRG1Q9Y653 693 aa8.27□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TRIP11Q15643 1979 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SSU72P8A0A1W2PR75 194 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EIF3CLB5ME19 914 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KIF2AO00139 706 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 AKR1B10O60218 316 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GPR32O75388 356 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RPLP2P05387 115 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CLTAP09496 248 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 DARSP14868 501 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FERP16591 822 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARF4P18085 180 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GRK4P32298 578 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SOX5P35711 763 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EIF4A3P38919 411 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TNFSF9P41273 254 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 STAT1P42224 750 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 AP3M2P53677 418 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 JAM2P57087 298 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KRT83P78385 493 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARID5AQ03989 594 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 BIRC3Q13489 604 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SPA17Q15506 151 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARHGAP44Q17R89 818 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 DCAF4L1Q3SXM0 396 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 C15orf39Q6ZRI6 1047 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NYAP1Q6ZVC0 841 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CATSPER4Q7RTX7 472 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RSPH3Q86UC2 560 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms