RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 FBXO18Q8NFZ0 1043 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 CCHCR1Q8TD31 782 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 STON2Q8WXE9 905 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 CYFIP2Q96F07 1278 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 LSM14BQ9BX40 385 aaKnown RBP6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 CSRNP2Q9H175 543 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 MANSC1Q9H8J5 431 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 DDX56Q9NY93 547 aaKnown RBP6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 XDHP47989 1333 aa6.38□□□□□ -1.39
SMARCA5-203ENST00000515531 TBKBP1A7MCY6 615 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 PDGFRBP09619 1106 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 RECQLP46063 649 aaPredicted RBP6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 KIF23Q02241 960 aaPredicted RBP6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 SP140Q13342 867 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 SEPT2Q15019 361 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 VPS72Q15906 364 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 MFSD14BQ5SR56 506 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 ZNF572Q7Z3I7 529 aaPredicted RBP6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 ZFP28Q8NHY6 868 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 HOXB13Q92826 284 aaPredicted RBP6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 HDAC10Q969S8 669 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 POGKQ9P215 609 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 TUBD1Q9UJT1 453 aa6.37□□□□□ -1.39
SMARCA5-203ENST00000515531 KLRG2A4D1S0 409 aaPredicted RBP6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 PLSCR1O15162 318 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 RECQL4O94761 1208 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 AMHP03971 560 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 SNRPA1P09661 255 aaKnown RBP6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 RAP2AP10114 183 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 MGAT1P26572 445 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 WASP42768 502 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 FOXE3Q13461 319 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 ODF1Q14990 250 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 BMT2Q1RMZ1 405 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 UAP1L1Q3KQV9 507 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 RRP12Q5JTH9 1297 aaKnown RBP6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 ANKS6Q68DC2 871 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 GGNQ86UU5 652 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 MIER2Q8N344 545 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 OR52N2Q8NGI0 321 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 OR2I1PQ8NGU4 316 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 TFAP2CQ92754 450 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 CHMP4CQ96CF2 233 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 FAM193BQ96PV7 902 aaPredicted RBP6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 CPEB1Q9BZB8 566 aaKnown RBP6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 LDAHQ9H6V9 325 aa6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 AJAP1Q9UKB5 411 aaPredicted RBP6.36□□□□□ -1.39
SMARCA5-203ENST00000515531 PJA2O43164 708 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 TEX33O43247 280 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 NEK2P51955 445 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 CLRN1P58418 232 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 AFMIDQ63HM1 303 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 NAIF1Q69YI7 327 aaPredicted RBP6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 HTR3DQ70Z44 454 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 GPRIN1Q7Z2K8 1008 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 RSPH3Q86UC2 560 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 COA7Q96BR5 231 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 ZNF341Q9BYN7 854 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 VPS11Q9H270 941 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 ZNF703Q9H7S9 590 aaPredicted RBP6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 AASDHPPTQ9NRN7 309 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 EIF2B4Q9UI10 523 aaKnown RBP6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 SIK3Q9Y2K2 1263 aa6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 LUC7L2Q9Y383 392 aaKnown RBP6.35□□□□□ -1.39
SMARCA5-203ENST00000515531 MYBBP1AQ9BQG0 1328 aaKnown RBP6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 CXorf49A8MYA2 514 aaPredicted RBP6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 MATN3O15232 486 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 GPR32O75388 356 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 ALDH1L1O75891 902 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 RPLP2P05387 115 aaKnown RBP6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 ALOX15P16050 662 aaPredicted RBP6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 ATP5JP18859 108 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 GUCY1A2P33402 732 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 SLC6A9P48067 706 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 ADKP55263 362 aaKnown RBP6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 RAP2BP61225 183 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 ATP2B3Q16720 1220 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 ATXN7L2Q5T6C5 722 aaPredicted RBP6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 C1QL3Q5VWW1 255 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 SLC35B2Q8TB61 432 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 CASKIN2Q8WXE0 1202 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 MRI1Q9BV20 369 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 TDP1Q9NUW8 608 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 SORCS3Q9UPU3 1222 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
SMARCA5-203ENST00000515531 C1SP09871 688 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 TNFRSF1AP19438 455 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 DDCP20711 480 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 RABL3Q5HYI8 236 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 DRICH1Q6PGQ1 229 aaPredicted RBP6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 OR10H5Q8NGA6 315 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 STAG1Q8WVM7 1258 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 ZNF503Q96F45 646 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 NDC1Q9BTX1 674 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms