RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 FHOD1Q9Y613 1164 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 CTSHP09668 335 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 GUCY2CP25092 1073 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 AP1B1Q10567 949 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 MEI1Q5TIA1 1274 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ACAD11Q709F0 780 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 COG1Q8WTW3 980 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 COG4Q9H9E3 785 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 DNAJC17Q9NVM6 304 aaKnown RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 PRDM4Q9UKN5 801 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 UPP2O95045 317 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ASMTLO95671 621 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ARL4DP49703 201 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 FXR1P51114 621 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 LRRN4CLQ8ND94 238 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 KLHL29Q96CT2 875 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 TRAIPQ9BWF2 469 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 FAF1Q9UNN5 650 aaPredicted RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 A0A1B0GTH6 734 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 PRRG1O14668 218 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 FOXD4Q12950 439 aaPredicted RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 KLHL38Q2WGJ6 581 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 GLB1LQ6UWU2 654 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 TBC1D1Q86TI0 1168 aaPredicted RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 XAB2Q9HCS7 855 aaKnown RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 GTSE1Q9NYZ3 720 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 L3MBTL1Q9Y468 752 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 SLC4A7Q9Y6M7 1214 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 UBA6A0AVT1 1052 aaPredicted RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 DGAT1O75907 488 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 SNX17Q15036 470 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ANGEL2Q5VTE6 544 aaKnown RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ATG9AQ7Z3C6 839 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ZNF564Q8TBZ8 553 aaPredicted RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ACTR5Q9H9F9 607 aaPredicted RBP16.97■□□□□ 0.31
TRIM41-207ENST00000515223 CAMSAP1Q5T5Y3 1602 aa16.97■□□□□ 0.31
TRIM41-207ENST00000515223 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 POU5F1BQ06416 359 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 TSPOAP1O95153 1857 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 PTPRMP28827 1452 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 STILQ15468 1287 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 TRMT10CQ7L0Y3 403 aaKnown RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 SLC26A7Q8TE54 656 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 RNF25Q96BH1 459 aaPredicted RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 CCL15-CCL14A0A0B4J2E2 113 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 TRIM28Q13263 835 aaKnown RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 CCL15Q16663 113 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 FSCBQ5H9T9 825 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 LCA5Q86VQ0 697 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 TTC17Q96AE7 1141 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 AFF4Q9UHB7 1163 aaKnown RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 CPS1P31327 1500 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 PPP1R12AO14974 1030 aaPredicted RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 PYGBP11216 843 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 YWHABP31946 246 aaKnown RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 RBP5P82980 135 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
TRIM41-207ENST00000515223 APPL2Q8NEU8 664 aa16.96■□□□□ 0.31
TRIM41-207ENST00000515223 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.3
TRIM41-207ENST00000515223 ASAP2O43150 1006 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 CACNB2Q08289 660 aaPredicted RBP16.95■□□□□ 0.3
TRIM41-207ENST00000515223 SPARCL1Q14515 664 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 REXO1L1PQ8IX06 675 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 NRBF2Q96F24 287 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 LRRC1Q9BTT6 524 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 SENP2Q9HC62 589 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 ANO9A1A5B4 782 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 RPS6KA5O75582 802 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 GUCY1A3Q02108 690 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 NR1H3Q13133 447 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 ANKS3Q6ZW76 656 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 TPX2Q9ULW0 747 aaKnown RBP16.95■□□□□ 0.3
TRIM41-207ENST00000515223 PCDHGB4Q9UN71 923 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 NR1I3Q14994 352 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 SDE2Q6IQ49 451 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 FBXO41Q8TF61 875 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 RMDN2Q96LZ7 410 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 NUP85Q9BW27 656 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 SLC38A7Q9NVC3 462 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 TUBE1Q9UJT0 475 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 E2F6O75461 281 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 EYA4O95677 639 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 KCNA1Q09470 495 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 FBXW10Q5XX13 1052 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 USP49Q70CQ1 688 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 TRIM55Q9BYV6 548 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 SEMA3FQ13275 785 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 DRAP1Q14919 205 aaPredicted RBP16.95■□□□□ 0.3
TRIM41-207ENST00000515223 RHOT1Q8IXI2 618 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 STKLD1Q8NE28 680 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 ELAC2Q9BQ52 826 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms