RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFC1-216ENST00000514572 MALP21145 153 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 STT3AP46977 705 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 ARFIP2P53365 341 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 WNT3AP56704 352 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 SNAPC2Q13487 334 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 WDR72Q3MJ13 1102 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 KHDC1Q4VXA5 237 aaKnown RBP6.3□□□□□ -1.4
RFC1-216ENST00000514572 TLDC1Q6P9B6 456 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 CLEC14AQ86T13 490 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 SESTD1Q86VW0 696 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
RFC1-216ENST00000514572 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 OR7D4Q8NG98 312 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 SMARCC2Q8TAQ2 1214 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 ZNF480Q8WV37 535 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 VRK1Q99986 396 aaPredicted RBP6.3□□□□□ -1.4
RFC1-216ENST00000514572 PNPOQ9NVS9 261 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 ABCF2Q9UG63 623 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 DGKBQ9Y6T7 804 aa6.3□□□□□ -1.4
RFC1-216ENST00000514572 A0A1W2PPC4 97 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 A0A1W2PPL8 197 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 F8W8V4 182 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 H3BUI4 141 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 PRAMEF4O60810 478 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 SYN1P17600 705 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
RFC1-216ENST00000514572 ADSLP30566 484 aaPredicted RBP6.29□□□□□ -1.4
RFC1-216ENST00000514572 ADCY8P40145 1251 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 GRK6P43250 576 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 FMO1Q01740 532 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 EIF4G1Q04637 1599 aaKnown RBP6.29□□□□□ -1.4
RFC1-216ENST00000514572 MTM1Q13496 603 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 DAG1Q14118 895 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 TRIM14Q14142 442 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 CNGA2Q16280 664 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 CCDC157Q569K6 752 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 TRIM68Q6AZZ1 485 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 FAM90A1Q86YD7 464 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 CELF5Q8N6W0 485 aaKnown RBP6.29□□□□□ -1.4
RFC1-216ENST00000514572 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
RFC1-216ENST00000514572 DPH1Q9BZG8 443 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 ADAM7Q9H2U9 754 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 WDCPQ9H6R7 721 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 KIAA1586Q9HCI6 787 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 AGO4Q9HCK5 861 aaKnown RBP6.29□□□□□ -1.4
RFC1-216ENST00000514572 STK32BQ9NY57 414 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 ZNF69Q9UC07 566 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 CDC23Q9UJX2 597 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 LRCH1Q9Y2L9 728 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 VWA7Q9Y334 891 aa6.29□□□□□ -1.4
RFC1-216ENST00000514572 POM121BA6NF01 834 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 WNT10BO00744 389 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 TLR5O60602 858 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 WDHD1O75717 1129 aaPredicted RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 IL18RAPO95256 599 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 HTRA4P83105 476 aaPredicted RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 TOP3AQ13472 1001 aaPredicted RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 TARBP2Q15633 366 aaKnown RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 HIBCHQ6NVY1 386 aaPredicted RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 LDHAL6AQ6ZMR3 332 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 OTOP2Q7RTS6 562 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 ATG4DQ86TL0 474 aaPredicted RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 PPP1R3BQ86XI6 285 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 ABI1Q8IZP0 508 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 ZCCHC14Q8WYQ9 949 aaKnown RBP6.28□□□□□ -1.4
RFC1-216ENST00000514572 ARL8AQ96BM9 186 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 TMX3Q96JJ7 454 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 ZSWIM3Q96MP5 696 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 CLIC6Q96NY7 704 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 ISCA1Q9BUE6 129 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 SAGE1Q9NXZ1 904 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 LZTS1Q9Y250 596 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 PCDHGB3Q9Y5G1 929 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 SNX13Q9Y5W8 968 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 DCAF1Q9Y4B6 1507 aa6.28□□□□□ -1.4
RFC1-216ENST00000514572 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
RFC1-216ENST00000514572 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.27□□□□□ -1.41
RFC1-216ENST00000514572 H0Y858 1186 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 GLI1P08151 1106 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 KITP10721 976 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 CD53P19397 219 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 PCSK1P29120 753 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 PRDX5P30044 214 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 SLC7A1P30825 629 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 CRHR1P34998 444 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 ETV4P43268 484 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 RENBPP51606 427 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 SMAD4Q13485 552 aaKnown RBP6.27□□□□□ -1.41
RFC1-216ENST00000514572 PMS2P11Q13670 270 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 ELF2Q15723 593 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 DACT2Q5SW24 774 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 CCDC174Q6PII3 467 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 LDHDQ86WU2 507 aa6.27□□□□□ -1.41
RFC1-216ENST00000514572 TRMT2AQ8IZ69 625 aaKnown RBP6.27□□□□□ -1.41
RFC1-216ENST00000514572 FAM9AQ8IZU1 332 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms