RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 MTF2Q9Y483 593 aaPredicted RBP11.35□□□□□ -0.59
DDR1-276ENST00000514534 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.59
DDR1-276ENST00000514534 COL4A3Q01955 1670 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 F8W810 466 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 TSPAN1O60635 241 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 LRP3O75074 770 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 TDP2O95551 362 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 POU2F2P09086 479 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 PTENP60484 403 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 NTHL1P78549 312 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 TFDP1Q14186 410 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
DDR1-276ENST00000514534 MXD4Q14582 209 aaPredicted RBP11.34□□□□□ -0.59
DDR1-276ENST00000514534 EMC2Q15006 297 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 PSMD5Q16401 504 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 ADCK5Q3MIX3 580 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 PDXDC1Q6P996 788 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 PRSS55Q6UWB4 352 aaPredicted RBP11.34□□□□□ -0.59
DDR1-276ENST00000514534 ZNF852Q6ZMS4 543 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 RTL10Q7L3V2 364 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 ETNPPLQ8TBG4 499 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 MTRQ99707 1265 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 IER2Q9BTL4 223 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 APOL6Q9BWW8 343 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 SLC26A6Q9BXS9 759 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
DDR1-276ENST00000514534 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 HES2Q9Y543 173 aa11.34□□□□□ -0.59
DDR1-276ENST00000514534 MAP1BP46821 2468 aaKnown RBP11.33□□□□□ -0.6
DDR1-276ENST00000514534 INO80B-WBP1J3KQ70 363 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 SLC30A4O14863 429 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 CCL16O15467 120 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 CD72P21854 359 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 TGM1P22735 817 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 TARSP26639 723 aaKnown RBP11.33□□□□□ -0.6
DDR1-276ENST00000514534 POU5F1BQ06416 359 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 ADCY1Q08828 1119 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 ELAVL2Q12926 359 aaKnown RBP11.33□□□□□ -0.6
DDR1-276ENST00000514534 PPP2R5CQ13362 524 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 NTRK3Q16288 839 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 UVSSAQ2YD98 709 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 LAIR1Q6GTX8 287 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 TSSK4Q6SA08 328 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 Q6ZUG5 572 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
DDR1-276ENST00000514534 C4orf19Q8IY42 314 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 PIK3R5Q8WYR1 880 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 BRF1Q92994 677 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 CPB2Q96IY4 423 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 TTPALQ9BTX7 342 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 DDX25Q9UHL0 483 aaKnown RBP11.33□□□□□ -0.6
DDR1-276ENST00000514534 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 NOTCH4Q99466 2003 aa11.33□□□□□ -0.6
DDR1-276ENST00000514534 EML1O00423 815 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 MAN2B1O00754 1011 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 ECI2O75521 394 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 IFNAR1P17181 557 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 YWHABP31946 246 aaKnown RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 TUSC3Q13454 348 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 XKR9Q5GH70 373 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 PPM1JQ5JR12 505 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 CEP57Q86XR8 500 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 CELF5Q8N6W0 485 aaKnown RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 GSTCDQ8NEC7 633 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 FAM20AQ96MK3 541 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 CLSTN3Q9BQT9 956 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 LXNQ9BS40 222 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 PARP2Q9UGN5 583 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 MRPS23Q9Y3D9 190 aaKnown RBP11.32□□□□□ -0.6
DDR1-276ENST00000514534 VWA8A3KMH1 1905 aa11.32□□□□□ -0.6
DDR1-276ENST00000514534 FOXD2O60548 495 aaPredicted RBP11.31□□□□□ -0.6
DDR1-276ENST00000514534 RETP07949 1114 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
DDR1-276ENST00000514534 AKAP5P24588 427 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 CCR3P51677 355 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 MTAPQ13126 283 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 EPHA7Q15375 998 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
DDR1-276ENST00000514534 FAM171A1Q5VUB5 890 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 GALNT17Q6IS24 598 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 BLIDQ8IZY5 108 aa11.31□□□□□ -0.6
DDR1-276ENST00000514534 FAM177A1Q8N128 213 aaPredicted RBP11.31□□□□□ -0.6
DDR1-276ENST00000514534 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms