RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 CEP89Q96ST8 783 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 PAGR1Q9BTK6 254 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 CARD9Q9H257 536 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 TAF1DQ9H5J8 278 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 ELP3Q9H9T3 547 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 ADARB2Q9NS39 739 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 KCNG1Q9UIX4 513 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 DIS3Q9Y2L1 958 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 STYXL1Q9Y6J8 313 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 POLR2AP24928 1970 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 OTOFQ9HC10 1997 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 A0A0G2JLL6 359 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 GSTTP1A0A1W2PQM5 241 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 ARL2P36404 184 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 NAMPTP43490 491 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 GUCY2FP51841 1108 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 WNT7BP56706 349 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 NLRP11P59045 1033 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 IRX3P78415 501 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 CDR2Q01850 454 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 GCNT1Q02742 428 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 ZNF211Q13398 564 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 PSMD6Q15008 389 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 PRRT2Q7Z6L0 340 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 DEPTORQ8TB45 409 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 AFAP1L1Q8TED9 768 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 WHAMMQ8TF30 809 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 PSPC1Q8WXF1 523 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 ZNF516Q92618 1163 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 KCNN1Q92952 543 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 OTUD5Q96G74 571 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 SH3GL2Q99962 352 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 HAPLN2Q9GZV7 340 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 R3HDMLQ9H3Y0 253 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 SLITRK6Q9H5Y7 841 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 KIAA1586Q9HCI6 787 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 AMACRQ9UHK6 382 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 AGO2Q9UKV8 859 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 ALG6Q9Y672 507 aa8.82□□□□□ -1
CPNE4-211ENST00000514439 DICER1Q9UPY3 1922 aaKnown RBP8.82□□□□□ -1
CPNE4-211ENST00000514439 TMEM110-MUSTN1A8MSY1 372 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 HSF2BPO75031 334 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 ZC3H11AO75152 810 aaKnown RBP eCLIP8.81□□□□□ -1
CPNE4-211ENST00000514439 MTA2O94776 668 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 PIGRP01833 764 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 ECHS1P30084 290 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 IREB2P48200 963 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 ACOT2P49753 483 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 CLDN10P78369 228 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 TDRD10Q5VZ19 366 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 NAA35Q5VZE5 725 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 ALS2CLQ60I27 953 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 EEPD1Q7L9B9 569 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 MREGQ8N565 214 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 GOLGA6L1Q8N7Z2 621 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 DDX1Q92499 740 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 CLMNQ96JQ2 1002 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 ZBTB45Q96K62 511 aaPredicted RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 FNBP1Q96RU3 617 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 RUFY1Q96T51 708 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 C1orf112Q9NSG2 853 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 NR2E1Q9Y466 385 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 MYH9P35579 1960 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 PTPRJQ12913 1337 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 GOLGA6CA6NDK9 693 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 MIF4GDA9UHW6 222 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 K7ERI5 159 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 KIAA0391O15091 583 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 CNMDO75829 334 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 GGPS1O95749 300 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 CALCAP01258 141 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 CYP1A2P05177 515 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 EDN1P05305 212 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 GOLGA6DP0CG33 693 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 KRT5P13647 590 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 TNNI1P19237 187 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 SCP2P22307 547 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 RFC5P40937 340 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 MARCKSL1P49006 195 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 CUL1Q13616 776 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 NEDD9Q14511 834 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 HLTFQ14527 1009 aaKnown RBP eCLIP8.81□□□□□ -1
CPNE4-211ENST00000514439 MESDQ14696 234 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 TARBP2Q15633 366 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 KCTD19Q17RG1 926 aaPredicted RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 ZACNQ401N2 412 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 CRELD2Q6UXH1 353 aaPredicted RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 ENOSF1Q7L5Y1 443 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 DDX42Q86XP3 938 aaKnown RBP eCLIP8.81□□□□□ -1
CPNE4-211ENST00000514439 EIF1ADQ8N9N8 165 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 ZNF564Q8TBZ8 553 aaPredicted RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 KRT35Q92764 455 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 ZNF653Q96CK0 615 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 ZIM3Q96PE6 472 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 NUP85Q9BW27 656 aa8.81□□□□□ -1
CPNE4-211ENST00000514439 TARS2Q9BW92 718 aaKnown RBP8.81□□□□□ -1
CPNE4-211ENST00000514439 ASCC2Q9H1I8 757 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms