RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TOPORSQ9NS56 1045 aaPredicted RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 IGSF5Q9NSI5 407 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 TYW1Q9NV66 732 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 TBC1D13Q9NVG8 400 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 MTCH2Q9Y6C9 303 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 EYSQ5T1H1 3165 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 A0A087X0B3 334 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 EPOPA6NHQ4 379 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 MYMKA6NI61 221 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 POLR2DO15514 142 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 NCK2O43639 380 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 NPTXRO95502 500 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 IGFBP4P22692 258 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 GRM5P41594 1212 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 POU5F1Q01860 360 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 KRT17Q04695 432 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 RNASELQ05823 741 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 MCL1Q07820 350 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 RAD51AP2Q09MP3 1159 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 ADGRE1Q14246 886 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 DHX8Q14562 1220 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 NOLC1Q14978 699 aaKnown RBP eCLIP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 FOXD4L6Q3SYB3 417 aaPredicted RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 NT5DC1Q5TFE4 455 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 KCNT2Q6UVM3 1135 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 FOXD4L3Q6VB84 417 aaPredicted RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 MAMSTRQ6ZN01 415 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 TAS1R3Q7RTX0 852 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 CEP57L1Q8IYX8 460 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 PDILTQ8N807 584 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 DNAJC19Q96DA6 116 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 FAM193BQ96PV7 902 aaPredicted RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 FIZ1Q96SL8 496 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 CCDC94Q9BW85 323 aaPredicted RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 EIF2AQ9BY44 585 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 TRIM9Q9C026 710 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 NXF3Q9H4D5 531 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 NSUN3Q9H649 340 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 CERS4Q9HA82 394 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 SPG21Q9NZD8 308 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
NEDD4-210ENST00000513957 MTUS1Q9ULD2 1270 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 KCNH3Q9ULD8 1083 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 TBX20Q9UMR3 447 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 PLAGL2Q9UPG8 496 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 EXOC7Q9UPT5 735 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 HPSEQ9Y251 543 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 UBE4BO95155 1302 aa8.97□□□□□ -0.97
NEDD4-210ENST00000513957 ARL5CA6NH57 179 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 SFI1A8K8P3 1242 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 HNRNPDLO14979 420 aaKnown RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 CLDN3O15551 220 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 FGF18O76093 207 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 RECQL4O94761 1208 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 SLFN14P0C7P3 912 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 IBSPP21815 317 aaPredicted RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 MLH1P40692 756 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 LIG4P49917 911 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 GATMP50440 423 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 YARSP54577 528 aaKnown RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 BCAR1P56945 870 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 DSC1Q08554 894 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 HSP90AA2PQ14568 343 aaPredicted RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 SLFN12LQ6IEE8 588 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 LRRC55Q6ZSA7 311 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 ZNF720Q7Z2F6 126 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 GPR65Q8IYL9 337 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 THNSL1Q8IYQ7 743 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 SLC39A11Q8N1S5 342 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 KLHL23Q8NBE8 558 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 MRPS27Q92552 414 aaKnown RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 LPPQ93052 612 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 DHX58Q96C10 678 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 TMEM169Q96HH4 297 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 CDCA3Q99618 268 aaPredicted RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 C7orf25Q9BPX7 421 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 TARS2Q9BW92 718 aaKnown RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 CDT1Q9H211 546 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 TMEM206Q9H813 350 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 MRPL44Q9H9J2 332 aaKnown RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 NGRNQ9NPE2 291 aaKnown RBP8.96□□□□□ -0.98
NEDD4-210ENST00000513957 TLR9Q9NR96 1032 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 SLC38A7Q9NVC3 462 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 COG5Q9UP83 839 aa8.96□□□□□ -0.98
NEDD4-210ENST00000513957 NPHP3-ACAD11A0A0J9YXS1 232 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 PVALEFA0A1B0GWK0 134 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 GOLGA6L4A6NEF3 574 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 MEIS3P2A8K0S8 358 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 ABLIM1O14639 778 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 KIAA0391O15091 583 aaKnown RBP8.95□□□□□ -0.98
NEDD4-210ENST00000513957 ZC3H11AO75152 810 aaKnown RBP eCLIP8.95□□□□□ -0.98
NEDD4-210ENST00000513957 ALDH2P05091 517 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 EDN1P05305 212 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 ITGB1P05556 798 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 THP07101 528 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 IDEP14735 1019 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms