RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 HELQQ8TDG4 1101 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 SMARCE1Q969G3 411 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 RAD9AQ99638 391 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 RNF39Q9H2S5 420 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 PTPRHQ9HD43 1115 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 PCDHA5Q9Y5H7 936 aa18■□□□□ 0.47
HMGCL-209ENST00000513148 ANKRD63C9JTQ0 380 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 CLDN3O15551 220 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 ZNF623O75123 536 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 EOMESO95936 686 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 CA3P07451 260 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 ITGA4P13612 1032 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SMAD3P84022 425 aaKnown RBP17.99■□□□□ 0.47
HMGCL-209ENST00000513148 DCAF4L1Q3SXM0 396 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SLC39A4Q6P5W5 647 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 ABI1Q8IZP0 508 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 CEP120Q8N960 986 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 ZNF397Q8NF99 534 aaPredicted RBP17.99■□□□□ 0.47
HMGCL-209ENST00000513148 KCNN1Q92952 543 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 LRCH3Q96II8 777 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
HMGCL-209ENST00000513148 MSRAQ9UJ68 235 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 INPP5FQ9Y2H2 1132 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 GDAQ9Y2T3 454 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 INSL6Q9Y581 213 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 CDH23Q9H251 3354 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 TBKBP1A7MCY6 615 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 RHOBTB3O94955 611 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SMC2O95347 1197 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 PROZP22891 400 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SEZ6Q53EL9 994 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 CLLU1OSQ5K130 101 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 AGMOQ6ZNB7 445 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 EPM2AIP1Q7L775 607 aaPredicted RBP17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SCFD1Q8WVM8 642 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SNTG2Q9NY99 539 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 PARP2Q9UGN5 583 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 EXOC7Q9UPT5 735 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 PCDHA11Q9Y5I1 949 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 SZT2Q5T011 3432 aa17.99■□□□□ 0.47
HMGCL-209ENST00000513148 ABLIM1O14639 778 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 EIF3DO15371 548 aaKnown RBP eCLIP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 PIGRP01833 764 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 HTRA4P83105 476 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 PSMD2Q13200 908 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 RAB30Q15771 203 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 ISM2Q6H9L7 571 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 APBB1IPQ7Z5R6 666 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 MRPL10Q7Z7H8 261 aaKnown RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 THNSL1Q8IYQ7 743 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 RSAD1Q9HA92 442 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 RC3H2Q9HBD1 1191 aaKnown RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 KLK14Q9P0G3 267 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 ZMYM2Q9UBW7 1377 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 MAPK8IP1Q9UQF2 711 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 CHD9Q3L8U1 2897 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 ARHGEF15O94989 841 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 MLH1P40692 756 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 BTG3Q14201 252 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 KCNB1Q14721 858 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 SMYD4Q8IYR2 804 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 HACE1Q8IYU2 909 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 CCDC112Q8NEF3 446 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 ZNF689Q96CS4 500 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-209ENST00000513148 TMEM206Q9H813 350 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 RMND1Q9NWS8 449 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 HCSTQ9UBK5 93 aa17.98■□□□□ 0.47
HMGCL-209ENST00000513148 HOXA2O43364 376 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 CCDC192P0DO97 292 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 MCF2P10911 925 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 HOXD13P35453 343 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 MCL1Q07820 350 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 GLB1LQ6UWU2 654 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 TMEM192Q8IY95 271 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 ELOA2Q8IYF1 753 aaPredicted RBP17.97■□□□□ 0.47
HMGCL-209ENST00000513148 ZNF507Q8TCN5 953 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 TIFAQ96CG3 184 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 GSDMAQ96QA5 445 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 MSTO1Q9BUK6 570 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 CLSTN2Q9H4D0 955 aa17.97■□□□□ 0.47
HMGCL-209ENST00000513148 BIN1O00499 593 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 RECQL4O94761 1208 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 AFF1P51825 1210 aaKnown RBP17.96■□□□□ 0.47
HMGCL-209ENST00000513148 PPP2R2DQ66LE6 453 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 SPRED2Q7Z698 418 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 POMGNT1Q8WZA1 660 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 ZFP42Q96MM3 310 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 GAD1Q99259 594 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 TMEM117Q9H0C3 514 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 NUP62CLQ9H1M0 184 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 UBE4BO95155 1302 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 CHD7Q9P2D1 2997 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 SPATA20Q8TB22 786 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms