RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 TDP1Q9NUW8 608 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 PARPBPQ9NWS1 579 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 PCDHGA9Q9Y5G4 932 aaKnown RBP7.05□□□□□ -1.28
CHD1-209ENST00000512844 PCDHGA8Q9Y5G5 932 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 PCDHGA7Q9Y5G6 932 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 PCDHGA6Q9Y5G7 932 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 PCDHGA3Q9Y5H0 932 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 ZMYM3Q14202 1370 aa7.05□□□□□ -1.28
CHD1-209ENST00000512844 GPR32O75388 356 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 S100BP04271 92 aaPredicted RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 SREBF1P36956 1147 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 ADKP55263 362 aaKnown RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 CREMQ03060 361 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 RRP1BQ14684 758 aaKnown RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 R3HDM1Q15032 1099 aaKnown RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 METTL24Q5JXM2 366 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 SPTY2D1Q68D10 685 aaPredicted RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 ZNF572Q7Z3I7 529 aaPredicted RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 XYLT1Q86Y38 959 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 MNTQ99583 582 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 LDAHQ9H6V9 325 aa7.04□□□□□ -1.28
CHD1-209ENST00000512844 EIF2B4Q9UI10 523 aaKnown RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 AJAP1Q9UKB5 411 aaPredicted RBP7.04□□□□□ -1.28
CHD1-209ENST00000512844 E2F8A0AVK6 867 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 PJA2O43164 708 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 INSRRP14616 1297 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 ATP5JP18859 108 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 WASP42768 502 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 ODR4Q5SWX8 454 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 DBX2Q6ZNG2 339 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 Q6ZRM9 215 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 LILRA3Q8N6C8 439 aaPredicted RBP7.03□□□□□ -1.28
CHD1-209ENST00000512844 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 TUBD1Q9UJT1 453 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 MYRFQ9Y2G1 1151 aa7.03□□□□□ -1.28
CHD1-209ENST00000512844 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 TBKBP1A7MCY6 615 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 C1QTNF3-AMACRE9PGA6 284 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 FZD9O00144 591 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 PPM1GO15355 546 aaPredicted RBP7.02□□□□□ -1.29
CHD1-209ENST00000512844 SCNN1GP51170 649 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 CLRN1P58418 232 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 RAP2BP61225 183 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
CHD1-209ENST00000512844 VPS72Q15906 364 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 ZXDCQ2QGD7 858 aaPredicted RBP7.02□□□□□ -1.29
CHD1-209ENST00000512844 MFSD14BQ5SR56 506 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 GADL1Q6ZQY3 521 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 RNF207Q6ZRF8 634 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 STON2Q8WXE9 905 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 HOOK2Q96ED9 719 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 HSPBAP1Q96EW2 488 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 PLEKHG4BQ96PX9 1271 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 REXO4Q9GZR2 422 aaKnown RBP7.02□□□□□ -1.29
CHD1-209ENST00000512844 IP6K2Q9UHH9 426 aa7.02□□□□□ -1.29
CHD1-209ENST00000512844 CCDC154A6NI56 674 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 EPHB1P54762 984 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 PUM1Q14671 1186 aaKnown RBP eCLIP7.01□□□□□ -1.29
CHD1-209ENST00000512844 SEPT2Q15019 361 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 CDSNQ15517 529 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 TMEM240Q5SV17 173 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 ATXN7L2Q5T6C5 722 aaPredicted RBP7.01□□□□□ -1.29
CHD1-209ENST00000512844 AFMIDQ63HM1 303 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 TMPRSS6Q8IU80 811 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 DRC7Q8IY82 874 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 OR10H5Q8NGA6 315 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 OR52N2Q8NGI0 321 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 HOXB13Q92826 284 aaPredicted RBP7.01□□□□□ -1.29
CHD1-209ENST00000512844 EXTL1Q92935 676 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 TMX3Q96JJ7 454 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 LSM14BQ9BX40 385 aaKnown RBP7.01□□□□□ -1.29
CHD1-209ENST00000512844 ZNF341Q9BYN7 854 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 MAN1C1Q9NR34 630 aa7.01□□□□□ -1.29
CHD1-209ENST00000512844 MYBBP1AQ9BQG0 1328 aaKnown RBP7.01□□□□□ -1.29
CHD1-209ENST00000512844 ALAS1P13196 640 aa7□□□□□ -1.29
CHD1-209ENST00000512844 ALOX15P16050 662 aaPredicted RBP7□□□□□ -1.29
CHD1-209ENST00000512844 DDCP20711 480 aa7□□□□□ -1.29
CHD1-209ENST00000512844 RABGGTBP53611 331 aa7□□□□□ -1.29
CHD1-209ENST00000512844 CDC42EP1Q00587 391 aa7□□□□□ -1.29
CHD1-209ENST00000512844 ODF1Q14990 250 aa7□□□□□ -1.29
CHD1-209ENST00000512844 BMT2Q1RMZ1 405 aa7□□□□□ -1.29
CHD1-209ENST00000512844 SPRED1Q7Z699 444 aa7□□□□□ -1.29
CHD1-209ENST00000512844 CPA6Q8N4T0 437 aa7□□□□□ -1.29
CHD1-209ENST00000512844 STAG1Q8WVM7 1258 aa7□□□□□ -1.29
CHD1-209ENST00000512844 COA7Q96BR5 231 aa7□□□□□ -1.29
CHD1-209ENST00000512844 MRI1Q9BV20 369 aa7□□□□□ -1.29
CHD1-209ENST00000512844 SORCS3Q9UPU3 1222 aa7□□□□□ -1.29
CHD1-209ENST00000512844 RUVBL1Q9Y265 456 aaKnown RBP7□□□□□ -1.29
CHD1-209ENST00000512844 ANKRD6Q9Y2G4 727 aa7□□□□□ -1.29
CHD1-209ENST00000512844 PCDHA13Q9Y5I0 950 aa7□□□□□ -1.29
CHD1-209ENST00000512844 CFAP20Q9Y6A4 193 aaKnown RBP7□□□□□ -1.29
CHD1-209ENST00000512844 CXorf49A8MYA2 514 aaPredicted RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 HTRA2O43464 458 aaPredicted RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 SGTAO43765 313 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 POMCP01189 267 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 SPATA31D3P0C874 917 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms