RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.82□□□□□ -0.52
PFDN1-204ENST00000512707 GOLGA8IPA6NC78 632 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 GOLGA8JA6NMD2 632 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 IL18RAPO95256 599 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 NPTXRO95502 500 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 EDN1P05305 212 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 CLTAP09496 248 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 ATP1A3P13637 1013 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 UBASH3AP57075 661 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 FANCCQ00597 558 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 POU5F1Q01860 360 aaKnown RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 ENPEPQ07075 957 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 KRT31Q15323 416 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 DCAF17Q5H9S7 520 aaPredicted RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 SARM1Q6SZW1 724 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 THNSL1Q8IYQ7 743 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 ZBTB45Q96K62 511 aaPredicted RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 FBXL18Q96ME1 805 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 RPF1Q9H9Y2 349 aaKnown RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 PTPRHQ9HD43 1115 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 ERVK-5Q9HDB9 667 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 TOPORSQ9NS56 1045 aaPredicted RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 LIMA1Q9UHB6 759 aaKnown RBP11.81□□□□□ -0.52
PFDN1-204ENST00000512707 TBX21Q9UL17 535 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 USP20Q9Y2K6 914 aa11.81□□□□□ -0.52
PFDN1-204ENST00000512707 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 N4BP1O75113 896 aaKnown RBP11.8□□□□□ -0.52
PFDN1-204ENST00000512707 RAG1P15918 1043 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 HOXA11P31270 313 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-204ENST00000512707 GRM5P41594 1212 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 CASP4P49662 377 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 ACOT2P49753 483 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 VAMP7P51809 220 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 COPB1P53618 953 aaKnown RBP11.8□□□□□ -0.52
PFDN1-204ENST00000512707 CETN1Q12798 172 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 BFSP1Q12934 665 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 UBE2Q1Q7Z7E8 422 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 IRF2BP1Q8IU81 584 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 CBWD2Q8IUF1 395 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 TMEM199Q8N511 208 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 TMC2Q8TDI7 906 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 ACAP3Q96P50 834 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 HSD3B7Q9H2F3 369 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 TAB2Q9NYJ8 693 aa11.8□□□□□ -0.52
PFDN1-204ENST00000512707 LRRC10BA6NIK2 292 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 GOLGA6L6A8MZA4 724 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 ABLIM1O14639 778 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 KIAA0355O15063 1070 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 TIMP1P01033 207 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 AFPP02771 609 aaKnown RBP11.79□□□□□ -0.52
PFDN1-204ENST00000512707 STAG3L1P0CL83 205 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 AP3M2P53677 418 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CCL23P55773 120 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 OSTNP61366 133 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CYP24A1Q07973 514 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 PSMD6Q15008 389 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 VWA3BQ502W6 1294 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CDR2LQ86X02 465 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-204ENST00000512707 BRSK2Q8IWQ3 736 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CD302Q8IX05 232 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CCDC127Q96BQ5 260 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 MFSD14AQ96MC6 490 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 VPS16Q9H269 839 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 NDST4Q9H3R1 872 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
PFDN1-204ENST00000512707 C1orf112Q9NSG2 853 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
PFDN1-204ENST00000512707 IFNKQ9P0W0 207 aa11.79□□□□□ -0.52
PFDN1-204ENST00000512707 CPSF3Q9UKF6 684 aaKnown RBP11.79□□□□□ -0.52
PFDN1-204ENST00000512707 LGALS16A8MUM7 142 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 PFKMP08237 780 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
PFDN1-204ENST00000512707 TNNI1P19237 187 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 GTF2H1P32780 548 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 CYP2C18P33260 490 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 UBXN1Q04323 297 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 RPUSD2Q8IZ73 545 aaKnown RBP11.78□□□□□ -0.52
PFDN1-204ENST00000512707 TSPAN18Q96SJ8 248 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 ADAM2Q99965 735 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 TRAIPQ9BWF2 469 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 HAPLN2Q9GZV7 340 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 PLEKHA5Q9HAU0 1116 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 UBN1Q9NPG3 1134 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 FAM105AQ9NUU6 356 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
PFDN1-204ENST00000512707 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
PFDN1-204ENST00000512707 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.78□□□□□ -0.52
PFDN1-204ENST00000512707 A0A1B0GTH6 734 aa11.77□□□□□ -0.53
PFDN1-204ENST00000512707 XPOTO43592 962 aaKnown RBP11.77□□□□□ -0.53
PFDN1-204ENST00000512707 FAM189A1O60320 539 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms