RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 MLH1P40692 756 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 SCNN1GP51170 649 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 MTERF2Q49AM1 385 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 PABPC1LQ4VXU2 614 aaKnown RBP13.43□□□□□ -0.26
COPS4-210ENST00000511708 PLA2G2CQ5R387 149 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 MAP4K3Q8IVH8 894 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 FANCBQ8NB91 859 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 ING5Q8WYH8 240 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 FAM3CQ92520 227 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 LOXL4Q96JB6 756 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 ZFP42Q96MM3 310 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 ARRDC1-AS1Q9H2J1 176 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 MINDY3Q9H8M7 445 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 IPPQ9Y573 584 aa13.43□□□□□ -0.26
COPS4-210ENST00000511708 TMEM150BA6NC51 233 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 hCG_1984214I3L0E3 225 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 PRC1O43663 620 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 NR1I2O75469 434 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 EPN2O95208 641 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 HOXA6P31267 233 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 CIITAP33076 1130 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 LIFRP42702 1097 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 FUT2Q10981 343 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 PTGDRQ13258 359 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 CCDC6Q16204 474 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 SLC5A9Q2M3M2 681 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 XKR3Q5GH77 459 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 JAKMIP3Q5VZ66 844 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 CASC1Q6TDU7 716 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 RAB11FIP4Q86YS3 637 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 ZNF713Q8N859 430 aaPredicted RBP13.42□□□□□ -0.26
COPS4-210ENST00000511708 GSTCDQ8NEC7 633 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 LNX1Q8TBB1 728 aaPredicted RBP13.42□□□□□ -0.26
COPS4-210ENST00000511708 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 PIK3R5Q8WYR1 880 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 SH2D3AQ9BRG2 576 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 BRD9Q9H8M2 597 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 AVENQ9NQS1 362 aaPredicted RBP13.42□□□□□ -0.26
COPS4-210ENST00000511708 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
COPS4-210ENST00000511708 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
COPS4-210ENST00000511708 MRPS23Q9Y3D9 190 aaKnown RBP13.42□□□□□ -0.26
COPS4-210ENST00000511708 BPTFQ12830 3046 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 AXIN1O15169 862 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 ADAM12O43184 909 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 SPINK2P20155 84 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 SFNP31947 248 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 RAP1GAPP47736 663 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 FOXC1Q12948 553 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 PRR16Q569H4 304 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 CEP68Q76N32 757 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 SRGAP1Q7Z6B7 1085 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 WDR5BQ86VZ2 330 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 IRF7Q92985 503 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
COPS4-210ENST00000511708 ZNF334Q9HCZ1 680 aaPredicted RBP13.41□□□□□ -0.26
COPS4-210ENST00000511708 PCNX2A6NKB5 2137 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 NRG2O14511 850 aaPredicted RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 GIPC1O14908 333 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 ADAMTS3O15072 1205 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 TOP3BO95985 862 aaKnown RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 CEBPBP17676 345 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 NOVA1P51513 510 aaKnown RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 JAK3P52333 1124 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 GRM2Q14416 872 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 PSMD5Q16401 504 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 AXDND1Q5T1B0 1012 aaPredicted RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 HEATR6Q6AI08 1181 aaKnown RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 RTL10Q7L3V2 364 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 SMC5Q8IY18 1101 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 RIT2Q99578 217 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 TRMT61BQ9BVS5 477 aaKnown RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 EIF2AQ9BY44 585 aaKnown RBP13.4□□□□□ -0.26
COPS4-210ENST00000511708 UNC45AQ9H3U1 944 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 C2orf42Q9NWW7 574 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 HES2Q9Y543 173 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 COL4A3BPQ9Y5P4 624 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 SLC12A7Q9Y666 1083 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
COPS4-210ENST00000511708 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
COPS4-210ENST00000511708 NUP205Q92621 2012 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 ASCC3Q8N3C0 2202 aaKnown RBP13.39□□□□□ -0.27
COPS4-210ENST00000511708 MSH4O15457 936 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 EDIL3O43854 480 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 RHOP08100 348 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 HOXC13P31276 330 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
COPS4-210ENST00000511708 RAB33AQ14088 237 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 RDM1Q8NG50 284 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
COPS4-210ENST00000511708 TTPALQ9BTX7 342 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms