RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ADI1Q9BV57 179 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 ACE2Q9BYF1 805 aaPredicted RBP4.26□□□□□ -1.73
CHD1-207ENST00000511628 SLITRK6Q9H5Y7 841 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 C14orf119Q9NWQ9 140 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 GPRC5DQ9NZD1 345 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 TRPM5Q9NZQ8 1165 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 TMPRSS11EQ9UL52 423 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 A0A087X1B8 175 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 SHTN1A0MZ66 631 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 B5MCH6 92 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 TRIM24O15164 1050 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 AKAP10O43572 662 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 ABHD16AO95870 558 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 CFBP00751 764 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 SPATA31D3P0C874 917 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 LAG3P18627 525 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 CTSSP25774 331 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 ECHS1P30084 290 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 RAB27AP51159 221 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 MRPS9P82933 396 aaKnown RBP4.25□□□□□ -1.73
CHD1-207ENST00000511628 SLC25A3Q00325 362 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 DPTQ07507 201 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 PCBP2Q15366 365 aaKnown RBP eCLIP4.25□□□□□ -1.73
CHD1-207ENST00000511628 NFE2Q16621 373 aaPredicted RBP4.25□□□□□ -1.73
CHD1-207ENST00000511628 MUM1L1Q5H9M0 696 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 TOR2AQ5JU69 321 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 METTL24Q5JXM2 366 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 GJC2Q5T442 439 aaPredicted RBP4.25□□□□□ -1.73
CHD1-207ENST00000511628 FNDC7Q5VTL7 733 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 ABHD15Q6UXT9 468 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 SPATA31D4Q6ZUB0 917 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 DOK3Q7L591 496 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 MRGPRGQ86SM5 289 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 AMOTL1Q8IY63 956 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 OR10H5Q8NGA6 315 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 OR52N2Q8NGI0 321 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 ZFP28Q8NHY6 868 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 PROKR1Q8TCW9 393 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 FATE1Q969F0 183 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 HOOK2Q96ED9 719 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 DCLRE1CQ96SD1 692 aaKnown RBP4.25□□□□□ -1.73
CHD1-207ENST00000511628 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 RTFDC1Q9BY42 306 aaPredicted RBP4.25□□□□□ -1.73
CHD1-207ENST00000511628 KCNH6Q9H252 994 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 PRDM12Q9H4Q4 367 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 DNAJC28Q9NX36 388 aa4.25□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA12O60330 932 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 SCGB1D2O95969 90 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 HLA-DOAP06340 250 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 MYBL2P10244 700 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 RBP3P10745 1247 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 APOBEC3AP31941 199 aaPredicted RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 CRHR1P34998 444 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 EPHB1P54762 984 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 RNASE9P60153 205 aaKnown RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 RAP2BP61225 183 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 CLUL1Q15846 466 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 NAIF1Q69YI7 327 aaPredicted RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 BTNL9Q6UXG8 535 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 LYSMD2Q8IV50 215 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 AMER2Q8N7J2 671 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 C1orf162Q8NEQ5 155 aaPredicted RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 RIN2Q8WYP3 895 aaPredicted RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 LARP4BQ92615 738 aaKnown RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 FUBP3Q96I24 572 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD1-207ENST00000511628 PRRX2Q99811 253 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 MENTQ9BUN1 341 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 REXO4Q9GZR2 422 aaKnown RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 ENKD1Q9H0I2 346 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 IFT122Q9HBG6 1241 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 CYP4F11Q9HBI6 524 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 TRPS1Q9UHF7 1281 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA9Q9Y5G4 932 aaKnown RBP4.24□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA8Q9Y5G5 932 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA7Q9Y5G6 932 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA6Q9Y5G7 932 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA3Q9Y5H0 932 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 PCDHGA2Q9Y5H1 932 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 ZMYM3Q14202 1370 aa4.24□□□□□ -1.73
CHD1-207ENST00000511628 RNASET2O00584 256 aaKnown RBP4.23□□□□□ -1.73
CHD1-207ENST00000511628 TMEM127O75204 238 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 PPFIA2O75334 1257 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 ITGB1P05556 798 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 GPR3P46089 330 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 SLC5A3P53794 718 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 NHLH2Q02577 135 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 KLF1Q13351 362 aaPredicted RBP4.23□□□□□ -1.73
CHD1-207ENST00000511628 ODF1Q14990 250 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 NOMO1Q15155 1222 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 PTPN21Q16825 1174 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 CRB2Q5IJ48 1285 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 PRAMEF14Q5SWL7 426 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 C1QL3Q5VWW1 255 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 LAIR1Q6GTX8 287 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 HTR3DQ70Z44 454 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 GDF7Q7Z4P5 450 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 ZBTB46Q86UZ6 589 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 RNF169Q8NCN4 708 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 GPR156Q8NFN8 814 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 LMBR1Q8WVP7 490 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms