RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TBX3O15119 743 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 NCK2O43639 380 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 KRT14P02533 472 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 TTLL4Q14679 1199 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 RASGEF1CQ8N431 466 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 SLC43A3Q8NBI5 491 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 GANQ9H2C0 597 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 PLEKHA4Q9H4M7 779 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 SALL4Q9UJQ4 1053 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 PCDHA12Q9UN75 941 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 UBIAD1Q9Y5Z9 338 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 H0YGN5 161 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 NKRFO15226 690 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 ATP9AO75110 1047 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 AFPP02771 609 aaKnown RBP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 TGFB3P10600 412 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 FERP16591 822 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 CCND2P30279 289 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 CTNNA1P35221 906 aaKnown RBP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 FNTAP49354 379 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 GSCP56915 257 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 PIK3R5Q8WYR1 880 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 DPF3Q92784 378 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 RUNDC3BQ96NL0 473 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 HTATIP2Q9BUP3 242 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
HMGB2-205ENST00000511316 ARMCX3Q9UH62 379 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 UTP11Q9Y3A2 253 aaKnown RBP13.86□□□□□ -0.19
HMGB2-205ENST00000511316 C5orf60A6NFR6 353 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PDXKO00764 312 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 KCNK3O14649 394 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 RAD51CO43502 376 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 H2AFZP0C0S5 128 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 GHRP10912 638 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 HOXD8P13378 290 aaPredicted RBP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 RFX1P22670 979 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PPP2R2AP63151 447 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 ADAM9Q13443 819 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 XRRA1Q6P2D8 792 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 H2AFVQ71UI9 128 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 SLFN11Q7Z7L1 901 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PCSK9Q8NBP7 692 aaKnown RBP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PSMB7Q99436 277 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 MPHOSPH6Q99547 160 aaKnown RBP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 A0A087X0T9 212 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 FAM187AA6NFU0 413 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 STAM2O75886 525 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 FTCDO95954 541 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 FAM228BP0C875 321 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 AP3B2Q13367 1082 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 NFIL3Q16649 462 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 HSDL1Q3SXM5 330 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 GKAP1Q5VSY0 366 aaPredicted RBP13.85□□□□□ -0.19
HMGB2-205ENST00000511316 C6orf89Q6UWU4 347 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PEX26Q7Z412 305 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 LRRC57Q8N9N7 239 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 KAT2BQ92831 832 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PRO3102Q9H379 93 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 PARP2Q9UGN5 583 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 ADAMTS1Q9UHI8 967 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 RASAL2Q9UJF2 1139 aa13.85□□□□□ -0.19
HMGB2-205ENST00000511316 CYP3A7-CYP3A51PA0A087WV96 503 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 E7EVH7 732 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 FOSP01100 380 aaPredicted RBP13.84□□□□□ -0.19
HMGB2-205ENST00000511316 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
HMGB2-205ENST00000511316 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
HMGB2-205ENST00000511316 CYP3A7P24462 503 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 SREBF1P36956 1147 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 HSD17B3P37058 310 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 ATP1A2P50993 1020 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 LMNB2Q03252 620 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 KCNH2Q12809 1159 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 EXOC3L4Q17RC7 722 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 BMT2Q1RMZ1 405 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 TRIM60Q495X7 471 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
HMGB2-205ENST00000511316 ALKBH5Q6P6C2 394 aaKnown RBP13.84□□□□□ -0.19
HMGB2-205ENST00000511316 CACNA2D3Q8IZS8 1091 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 ANKS4BQ8N8V4 417 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 CYFIP2Q96F07 1278 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 MS4A14Q96JA4 679 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 ANO3Q9BYT9 981 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 AP5M1Q9H0R1 490 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 NAGPAQ9UK23 515 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms