RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 LRRC27Q9C0I9 530 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 HAPLN2Q9GZV7 340 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 CCDC113Q9H0I3 377 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 NXF3Q9H4D5 531 aaKnown RBP5.93□□□□□ -1.46
PROM1-211ENST00000511153 PDZD7Q9H5P4 517 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.93□□□□□ -1.46
PROM1-211ENST00000511153 LARSQ9P2J5 1176 aaKnown RBP5.93□□□□□ -1.46
PROM1-211ENST00000511153 PARP2Q9UGN5 583 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 USP25Q9UHP3 1055 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 TBX20Q9UMR3 447 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 NR2E3Q9Y5X4 410 aa5.93□□□□□ -1.46
PROM1-211ENST00000511153 MICAL3Q7RTP6 2002 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 PTPRSQ13332 1948 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 FRMD3A2A2Y4 597 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 HNRNPDLO14979 420 aaKnown RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 GPR182O15218 404 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ASAP2O43150 1006 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 GAS2O43903 313 aaKnown RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 FGBP02675 491 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 SFPQP23246 707 aaKnown RBP eCLIP5.92□□□□□ -1.46
PROM1-211ENST00000511153 HOXA11P31270 313 aaPredicted RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 TNFSF9P41273 254 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ACOT2P49753 483 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ZNF131P52739 623 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 DPCR1Q3MIW9 517 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 PLEKHG4Q58EX7 1191 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 GLRA4Q5JXX5 417 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 UBXN11Q5T124 520 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ATF7IP2Q5U623 682 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 LMBRD2Q68DH5 695 aaPredicted RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 CDCA2Q69YH5 1023 aaPredicted RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 KANK3Q6NY19 840 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 SLC39A4Q6P5W5 647 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 C11orf57Q6ZUT1 292 aaPredicted RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 SRGAP1Q7Z6B7 1085 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 EXOC8Q8IYI6 725 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 CCDC47Q96A33 483 aaKnown RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 ELMO3Q96BJ8 720 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 TIGD1Q96MW7 591 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ACCSQ96QU6 501 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 FAM213AQ9BRX8 229 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 TRIM6Q9C030 488 aaPredicted RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 C2orf40Q9H1Z8 148 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 MMRN2Q9H8L6 949 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 MAGEF1Q9HAY2 307 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 IL23AQ9NPF7 189 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 AGPAT5Q9NUQ2 364 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 SNTG2Q9NY99 539 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 KCND2Q9NZV8 630 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ARHGAP28Q9P2N2 729 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 HOOK1Q9UJC3 728 aaKnown RBP5.92□□□□□ -1.46
PROM1-211ENST00000511153 PPME1Q9Y570 386 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 ZMYM2Q9UBW7 1377 aa5.92□□□□□ -1.46
PROM1-211ENST00000511153 PHLPP2Q6ZVD8 1323 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 LAMA3Q16787 3333 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.91□□□□□ -1.46
PROM1-211ENST00000511153 PVALEFA0A1B0GWK0 134 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 ENPP3O14638 875 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 ZSCAN20P17040 1043 aaPredicted RBP5.91□□□□□ -1.46
PROM1-211ENST00000511153 PBX3P40426 434 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 RGS19P49795 217 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 GUCY2FP51841 1108 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CDR1P51861 262 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 WNT7BP56706 349 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 KCNH2Q12809 1159 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 PPIGQ13427 754 aaKnown RBP eCLIP5.91□□□□□ -1.46
PROM1-211ENST00000511153 MORC3Q14149 939 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 IKBKEQ14164 716 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 ZSCAN23Q3MJ62 389 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CEP135Q66GS9 1140 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 SCARA3Q6AZY7 606 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 ARMCX5Q6P1M9 558 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CNNM4Q6P4Q7 775 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CNKSR3Q6P9H4 555 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 ZNF410Q86VK4 478 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 NELFBQ8WX92 580 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 POMGNT1Q8WZA1 660 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CCDC34Q96HJ3 373 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 RNPC3Q96LT9 517 aaKnown RBP5.91□□□□□ -1.46
PROM1-211ENST00000511153 ZFP42Q96MM3 310 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 ACO2Q99798 780 aaKnown RBP5.91□□□□□ -1.46
PROM1-211ENST00000511153 MSTO1Q9BUK6 570 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 TIPINQ9BVW5 301 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 MRPL4Q9BYD3 311 aaKnown RBP5.91□□□□□ -1.46
PROM1-211ENST00000511153 DNAJC25Q9H1X3 360 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CDT1Q9H211 546 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 SEMA6BQ9H3T3 888 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 FZD8Q9H461 694 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 CERS4Q9HA82 394 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 PRMT7Q9NVM4 692 aaPredicted RBP5.91□□□□□ -1.46
PROM1-211ENST00000511153 MTUS1Q9ULD2 1270 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 LRFN2Q9ULH4 789 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 PCDHB2Q9Y5E7 798 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 GBF1Q92538 1859 aa5.91□□□□□ -1.46
PROM1-211ENST00000511153 MYO9BQ13459 2157 aa5.9□□□□□ -1.46
PROM1-211ENST00000511153 LCHNA4D1U4 455 aa5.9□□□□□ -1.46
PROM1-211ENST00000511153 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms