RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MFAP3LO75121 409 aa9.35□□□□□ -0.91
USP53-206ENST00000510737 HK1P19367 917 aa9.35□□□□□ -0.91
USP53-206ENST00000510737 PTGS2P35354 604 aa9.35□□□□□ -0.91
USP53-206ENST00000510737 NPEPPSP55786 919 aa9.35□□□□□ -0.91
USP53-206ENST00000510737 PTCH1Q13635 1447 aa9.35□□□□□ -0.91
USP53-206ENST00000510737 MBNL2Q5VZF2 373 aaKnown RBP9.35□□□□□ -0.91
USP53-206ENST00000510737 UBE2R2Q712K3 238 aaPredicted RBP9.35□□□□□ -0.91
USP53-206ENST00000510737 NOL10Q9BSC4 688 aaKnown RBP9.35□□□□□ -0.91
USP53-206ENST00000510737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP53-206ENST00000510737 GLI3P10071 1580 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 ARHGEF5Q12774 1597 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 NOS1P29475 1434 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 RIMS2Q9UQ26 1411 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 GOLGA6L6A8MZA4 724 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 ASMTLO95671 621 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 SF3A1Q15459 793 aaKnown RBP9.34□□□□□ -0.91
USP53-206ENST00000510737 TIGD7Q6NT04 549 aaPredicted RBP9.34□□□□□ -0.91
USP53-206ENST00000510737 NXPE1Q8N323 547 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 ORAI3Q9BRQ5 295 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
USP53-206ENST00000510737 DCCP43146 1447 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 RFPL3O75679 317 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 IPO13O94829 963 aaKnown RBP9.33□□□□□ -0.92
USP53-206ENST00000510737 CD69Q07108 199 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 CPEB1Q9BZB8 566 aaKnown RBP9.33□□□□□ -0.92
USP53-206ENST00000510737 RRP7BPQ9NSQ0 103 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 SYNPO2Q9UMS6 1093 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 LAMC1P11047 1609 aa9.33□□□□□ -0.92
USP53-206ENST00000510737 ZNF891A8MT65 544 aaPredicted RBP9.32□□□□□ -0.92
USP53-206ENST00000510737 TGM5O43548 720 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 PCDH8O95206 1070 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 ZBTB41Q5SVQ8 909 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 APBB1IPQ7Z5R6 666 aaPredicted RBP9.32□□□□□ -0.92
USP53-206ENST00000510737 UIMC1Q96RL1 719 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 MTFR1LQ9H019 292 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 ZNF768Q9H5H4 540 aaKnown RBP9.32□□□□□ -0.92
USP53-206ENST00000510737 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 SORCS3Q9UPU3 1222 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 HS3ST4Q9Y661 456 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 BRWD3Q6RI45 1802 aa9.32□□□□□ -0.92
USP53-206ENST00000510737 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
USP53-206ENST00000510737 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.31□□□□□ -0.92
USP53-206ENST00000510737 LCHNA4D1U4 455 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 TMEM191CA6NGB0 347 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 HOXA3O43365 443 aaPredicted RBP9.31□□□□□ -0.92
USP53-206ENST00000510737 FLT3P36888 993 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 C1QTNF8P60827 252 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 DSG1Q02413 1049 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 DCAF17Q5H9S7 520 aaPredicted RBP9.31□□□□□ -0.92
USP53-206ENST00000510737 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
USP53-206ENST00000510737 CHTF18Q8WVB6 975 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
USP53-206ENST00000510737 CRAMP1Q96RY5 1269 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 FDXACB1Q9BRP7 624 aaPredicted RBP9.31□□□□□ -0.92
USP53-206ENST00000510737 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 RALGAPBQ86X10 1494 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 MYPNQ86TC9 1320 aa9.31□□□□□ -0.92
USP53-206ENST00000510737 ALDH1A2O94788 518 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 FSBPO95073 299 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 F2P00734 622 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 GNAT2P19087 354 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 C21orf62-AS1Q17RA5 79 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 KRT27Q7Z3Y8 459 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 LSM14BQ9BX40 385 aaKnown RBP9.3□□□□□ -0.92
USP53-206ENST00000510737 MS4A5Q9H3V2 200 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 DUOX2Q9NRD8 1548 aa9.3□□□□□ -0.92
USP53-206ENST00000510737 GRID2IPA4D2P6 1211 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 KPNA6O60684 536 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 BMP5P22003 454 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 ADRA1BP35368 520 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 CASRP41180 1078 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 MAN2A1Q16706 1144 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 UNC5BQ8IZJ1 945 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 CPT1CQ8TCG5 803 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 HIST1H2AHQ96KK5 128 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 HIST1H2AJQ99878 128 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 MAGEC2Q9UBF1 373 aaPredicted RBP9.29□□□□□ -0.92
USP53-206ENST00000510737 TRPM2O94759 1503 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 CAMTA1Q9Y6Y1 1673 aa9.29□□□□□ -0.92
USP53-206ENST00000510737 MYOM2P54296 1465 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 KANK1Q14678 1352 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 CEP350Q5VT06 3117 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 EHBP1L1Q8N3D4 1523 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 AHRRA9YTQ3 701 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 LY86O95711 162 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 GCP02774 474 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 FAM189BP81408 668 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 LRRC32Q14392 662 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 ZZZ3Q8IYH5 903 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 MSL3Q8N5Y2 521 aaKnown RBP9.28□□□□□ -0.92
USP53-206ENST00000510737 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 THG1LQ9NWX6 298 aaKnown RBP9.28□□□□□ -0.92
USP53-206ENST00000510737 MARF1Q9Y4F3 1742 aaKnown RBP9.28□□□□□ -0.92
USP53-206ENST00000510737 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
USP53-206ENST00000510737 UTRNP46939 3433 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms