RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 NECTIN4Q96NY8 510 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 TMEM134Q9H6X4 195 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 CACNG4Q9UBN1 327 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 ADAM28Q9UKQ2 775 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 TNFSF13BQ9Y275 285 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 GDAQ9Y2T3 454 aa25.27■■□□□ 1.64
SNF8-209ENST00000510558 THP07101 528 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 PDCP20941 246 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 KIAA0319Q5VV43 1072 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 KANK3Q6NY19 840 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 TAS1R3Q7RTX0 852 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 APBB1IPQ7Z5R6 666 aaPredicted RBP25.26■■□□□ 1.63
SNF8-209ENST00000510558 FBXL18Q96ME1 805 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 GPR62Q9BZJ7 368 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 CXCL16Q9H2A7 254 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 POMKQ9H5K3 350 aa25.26■■□□□ 1.63
SNF8-209ENST00000510558 RBM19Q9Y4C8 960 aaKnown RBP25.26■■□□□ 1.63
SNF8-209ENST00000510558 SFI1A8K8P3 1242 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 WEE2P0C1S8 567 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 PLA2G4BP0C869 781 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 MTHFRP42898 656 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 SLC12A3P55017 1021 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 DSG1Q02413 1049 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 RAD51AP2Q09MP3 1159 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 HSP90AA2PQ14568 343 aaPredicted RBP25.25■■□□□ 1.63
SNF8-209ENST00000510558 KIAA1841Q6NSI8 718 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 RIPOR3Q96MK2 946 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 ACO2Q99798 780 aaKnown RBP25.25■■□□□ 1.63
SNF8-209ENST00000510558 PAAF1Q9BRP4 392 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 MRPL4Q9BYD3 311 aaKnown RBP25.25■■□□□ 1.63
SNF8-209ENST00000510558 CHST7Q9NS84 486 aa25.25■■□□□ 1.63
SNF8-209ENST00000510558 C2orf16Q68DN1 1984 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 DENND4AQ7Z401 1863 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 CASTOR2A6NHX0 329 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 SLC26A4O43511 780 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 TADA2AO75478 443 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 ADH1AP07327 375 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 SP100P23497 879 aaPredicted RBP25.24■■□□□ 1.63
SNF8-209ENST00000510558 SF3A1Q15459 793 aaKnown RBP25.24■■□□□ 1.63
SNF8-209ENST00000510558 SFXN1Q9H9B4 322 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 RXFP1Q9HBX9 757 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 KCND2Q9NZV8 630 aa25.24■■□□□ 1.63
SNF8-209ENST00000510558 SPDYE4A6NLX3 237 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 SLC16A4O15374 487 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 TEX28O15482 410 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 UBA7P41226 1012 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 NAB2Q15742 525 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 USP41Q3LFD5 358 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 ZNF568Q3ZCX4 644 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 CALML4Q96GE6 196 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 B3GALT6Q96L58 329 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 NTPCRQ9BSD7 190 aaKnown RBP25.23■■□□□ 1.63
SNF8-209ENST00000510558 TARS2Q9BW92 718 aaKnown RBP25.23■■□□□ 1.63
SNF8-209ENST00000510558 CDT1Q9H211 546 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 NR2E1Q9Y466 385 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 CITO14578 2027 aa25.23■■□□□ 1.63
SNF8-209ENST00000510558 MTCL1Q9Y4B5 1905 aaKnown RBP25.23■■□□□ 1.63
SNF8-209ENST00000510558 SF3B1O75533 1304 aaKnown RBP eCLIP25.22■■□□□ 1.63
SNF8-209ENST00000510558 PLS3P13797 630 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 LONP1P36776 959 aaKnown RBP25.22■■□□□ 1.63
SNF8-209ENST00000510558 GRIN1Q05586 938 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 ATAT1Q5SQI0 421 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 TMC5Q6UXY8 1006 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 CEP120Q8N960 986 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 HASPINQ8TF76 798 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 SPIRE2Q8WWL2 714 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 EDAQ92838 391 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 PTPRHQ9HD43 1115 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 TSHZ2Q9NRE2 1034 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 KCNG1Q9UIX4 513 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 TECTAO75443 2155 aa25.22■■□□□ 1.63
SNF8-209ENST00000510558 KIF4AO95239 1232 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 GRM5P41594 1212 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 GLRA4Q5JXX5 417 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 GPR65Q8IYL9 337 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 FEZF2Q8TBJ5 459 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 RIN2Q8WYP3 895 aaPredicted RBP25.21■■□□□ 1.63
SNF8-209ENST00000510558 CCDC94Q9BW85 323 aaPredicted RBP25.21■■□□□ 1.63
SNF8-209ENST00000510558 MAN1C1Q9NR34 630 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 HCN4Q9Y3Q4 1203 aa25.21■■□□□ 1.63
SNF8-209ENST00000510558 VWA8A3KMH1 1905 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 NPHP3-ACAD11A0A0J9YXS1 232 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 GLUD1P00367 558 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 SYT1P21579 422 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 SMTNP53814 917 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 CACNB1Q02641 598 aaPredicted RBP25.2■■□□□ 1.62
SNF8-209ENST00000510558 ARSHQ5FYA8 562 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 GPR149Q86SP6 731 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 ZBTB33Q86T24 672 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 TMEM161BQ8NDZ6 487 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 LRRC15Q8TF66 581 aa25.2■■□□□ 1.62
SNF8-209ENST00000510558 INTS4Q96HW7 963 aaKnown RBP25.2■■□□□ 1.62
SNF8-209ENST00000510558 PPP1R10Q96QC0 940 aaKnown RBP25.2■■□□□ 1.62
SNF8-209ENST00000510558 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.2■■□□□ 1.62
SNF8-209ENST00000510558 MCF2P10911 925 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 PLCG1P19174 1290 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 PROZP22891 400 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 YARSP54577 528 aaKnown RBP25.19■■□□□ 1.62
SNF8-209ENST00000510558 OSTNP61366 133 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 ZXDAP98168 799 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms