RNA–Protein interactions for RNA: ENST00000509980.5

EXOSC9-208, Transcript of exosome component 9, human

TSL 2

Gene EXOSC9, Length 1,317 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC9-208	ENST00000509980	hCG_1984214	I3L0E3	225 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980		K7ESF4	209 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	CCL16	O15467	120 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	XYLB	O75191	536 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	MAF	O75444	373 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	NR1I2	O75469	434 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	PAPSS2	O95340	614 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ZNF806	P0C7X5	589 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	CHRNB1	P11230	501 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ITGA4	P13612	1032 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	CIITA	P33076	1130 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	MLH1	P40692	756 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	SCNN1G	P51170	649 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	PRR16	Q569H4	304 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	STPG1	Q5TH74	334 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	LONP2	Q86WA8	852 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	CHD1L	Q86WJ1	897 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ZNF713	Q8N859	430 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ELSPBP1	Q96BH3	223 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	TMEM87B	Q96K49	555 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ZFP42	Q96MM3	310 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	SH2D3A	Q9BRG2	576 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	MINDY3	Q9H8M7	445 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	BARHL2	Q9NY43	387 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	GDE1	Q9NZC3	331 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	DNMT3B	Q9UBC3	853 aa	Known RBP	11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ADAM28	Q9UKQ2	775 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	POLI	Q9UNA4	740 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	IPP	Q9Y573	584 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	SLC12A7	Q9Y666	1083 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	SDK1	Q7Z5N4	2213 aa		11.65	□□□□□ -0.54
EXOSC9-208	ENST00000509980	ASH1L	Q9NR48	2969 aa	Known RBP	11.65	□□□□□ -0.55
EXOSC9-208	ENST00000509980	TMEM8B	A6NDV4	472 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ADAMTS3	O15072	1205 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	FCAR	P24071	287 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SFN	P31947	248 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	MCM5	P33992	734 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	GSE1	Q14687	1217 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	PABPC1L	Q4VXU2	614 aa	Known RBP	11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	XKR3	Q5GH77	459 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	TANGO2	Q6ICL3	276 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	B4GALNT3	Q6L9W6	998 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SPEM1	Q8N4L4	309 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	GSTCD	Q8NEC7	633 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	LNX1	Q8TBB1	728 aa	Predicted RBP	11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ING5	Q8WYH8	240 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	IGSF10	Q6WRI0	2623 aa		11.64	□□□□□ -0.55
EXOSC9-208	ENST00000509980	MSH4	O15457	936 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ADAM12	O43184	909 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	JAK3	P52333	1124 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	RING1	Q06587	406 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SLC5A9	Q2M3M2	681 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	PSAPL1	Q6NUJ1	521 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SRGAP1	Q7Z6B7	1085 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SGMS1	Q86VZ5	419 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	MICU3	Q86XE3	530 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	MAP4K3	Q8IVH8	894 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	C12orf50	Q8NA57	414 aa	Predicted RBP	11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SLC7A14	Q8TBB6	771 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	PIK3R5	Q8WYR1	880 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	FAM3C	Q92520	227 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	MCRS1	Q96EZ8	462 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	RIT2	Q99578	217 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	EIF2A	Q9BY44	585 aa	Known RBP	11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ARRDC1-AS1	Q9H2J1	176 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	UNC45A	Q9H3U1	944 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	TRPV5	Q9NQA5	729 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	LHX6	Q9UPM6	363 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	MRPS23	Q9Y3D9	190 aa	Known RBP	11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	HES2	Q9Y543	173 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	COL4A3BP	Q9Y5P4	624 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980		V9GY48	417 aa	Predicted RBP	11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	EML5	Q05BV3	1969 aa		11.63	□□□□□ -0.55
EXOSC9-208	ENST00000509980	CHMP2A	O43633	222 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	EDIL3	O43854	480 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	HOXA6	P31267	233 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	NUCB1	Q02818	461 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	CCDC6	Q16204	474 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	UVSSA	Q2YD98	709 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	PLA2G2C	Q5R387	149 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ANO5	Q75V66	913 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	RDM1	Q8NG50	284 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	EXOC6	Q8TAG9	804 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	RABGGTA	Q92696	567 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	GATA6	Q92908	595 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SLC5A5	Q92911	643 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	LOXL4	Q96JB6	756 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ADAM33	Q9BZ11	813 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	BRD9	Q9H8M2	597 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	AVEN	Q9NQS1	362 aa	Predicted RBP	11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	PIAS3	Q9Y6X2	628 aa		11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	2e-6	■■■□□ 16.1
EXOSC9-208	ENST00000509980	HELZ2	Q9BYK8	2649 aa	Known RBP	11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	SMG1	Q96Q15	3661 aa	Known RBP	11.62	□□□□□ -0.55
EXOSC9-208	ENST00000509980	ESYT2	A0FGR8	921 aa		11.61	□□□□□ -0.55
EXOSC9-208	ENST00000509980	TAF4	O00268	1085 aa		11.61	□□□□□ -0.55
EXOSC9-208	ENST00000509980	NRG2	O14511	850 aa	Predicted RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms