RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	SPEM1	Q8N4L4	309 aa		10.89	□□□□□ -0.67
PTPN20-223	ENST00000509900	GPATCH3	Q96I76	525 aa		10.89	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZNF668	Q96K58	619 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN20-223	ENST00000509900	MARCH5	Q9NX47	278 aa		10.89	□□□□□ -0.67
PTPN20-223	ENST00000509900	MAD2L2	Q9UI95	211 aa		10.89	□□□□□ -0.67
PTPN20-223	ENST00000509900	PI4KA	P42356	2102 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	ABCA7	Q8IZY2	2146 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZMYM6	O95789	1325 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	IGKV6D-21	A0A0A0MT36	114 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900		J3QL48	77 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	MAN2B1	O00754	1011 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	MEIS2	O14770	477 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	CYTH3	O43739	400 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	C1QL1	O75973	258 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	C1R	P00736	705 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	PLA2G2A	P14555	144 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	SLC26A2	P50443	739 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	CLCN3	P51790	818 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	TRAF1	Q13077	416 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZNF484	Q5JVG2	852 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	WDR5B	Q86VZ2	330 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	IQCA1	Q86XH1	822 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	NPAS3	Q8IXF0	933 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	METTL13	Q8N6R0	699 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	SMARCC2	Q8TAQ2	1214 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	DNASE1L2	Q92874	299 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	RIOX1	Q9H6W3	641 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	DACT1	Q9NYF0	836 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	SSX2IP	Q9Y2D8	614 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	FAN1	Q9Y2M0	1017 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	PCDHGA5	Q9Y5G8	931 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	VWA8	A3KMH1	1905 aa		10.88	□□□□□ -0.67
PTPN20-223	ENST00000509900	THADA	Q6YHU6	1953 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	PNMA6F	A0A0J9YX94	578 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	PALM3	A6NDB9	673 aa	Predicted RBP	10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	NRP1	O14786	923 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	ECI2	O75521	394 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	CSDE1	O75534	798 aa	Known RBP	10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	ATG7	O95352	703 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	DARS	P14868	501 aa	Known RBP	10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	ATP4A	P20648	1035 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	HOXA6	P31267	233 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	AFF1	P51825	1210 aa	Known RBP	10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	DSG1	Q02413	1049 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	CCDC178	Q5BJE1	867 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	DAB2IP	Q5VWQ8	1189 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	GLYCTK	Q8IVS8	523 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	PI4K2B	Q8TCG2	481 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	GAB3	Q8WWW8	586 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	FAM3C	Q92520	227 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	REPIN1	Q9BWE0	567 aa	Known RBP	10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	TRAIP	Q9BWF2	469 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	JADE2	Q9NQC1	790 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	VPS45	Q9NRW7	570 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZBTB40	Q9NUA8	1239 aa		10.87	□□□□□ -0.67
PTPN20-223	ENST00000509900	PIK3CD	O00329	1044 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	ALDH2	P05091	517 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	CLCN1	P35523	988 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	WDR44	Q5JSH3	913 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	LCE2A	Q5TA79	106 aa	Predicted RBP	10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	TANGO2	Q6ICL3	276 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900		Q6ZS52	159 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	CACNA2D4	Q7Z3S7	1137 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	LINC01465	Q8N7H1	131 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	DEFB124	Q8NES8	71 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	ING5	Q8WYH8	240 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	LRIG1	Q96JA1	1093 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	B3GALT6	Q96L58	329 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	MBOAT7	Q96N66	472 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	HNRNPAB	Q99729	332 aa	Known RBP	10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	TMEM175	Q9BSA9	504 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	RNF41	Q9H4P4	317 aa	Predicted RBP	10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	KCNH7	Q9NS40	1196 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	RBM12	Q9NTZ6	932 aa	Known RBP	10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	AKT3	Q9Y243	479 aa		10.86	□□□□□ -0.67
PTPN20-223	ENST00000509900	NFASC	O94856	1347 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	PTPN13	Q12923	2485 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	PIEZO2	Q9H5I5	2752 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	PTPRB	P23467	1997 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	LNP1	A1A4G5	178 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	FAM221B	A6H8Z2	402 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900		B4E1Z4	1266 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	MAFG	O15525	162 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	RPP40	O75818	363 aa	Known RBP	10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	CCNE2	O96020	404 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	RPL17	P18621	184 aa	Known RBP	10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	ITGB3BP	Q13352	177 aa	Predicted RBP	10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	GRM2	Q14416	872 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	KRI1	Q8N9T8	703 aa	Known RBP	10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	CUL5	Q93034	780 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	CHST7	Q9NS84	486 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	FAM105A	Q9NUU6	356 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	HCFC1R1	Q9NWW0	138 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	FBXW11	Q9UKB1	542 aa		10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.85	□□□□□ -0.67
PTPN20-223	ENST00000509900	PIAS3	Q9Y6X2	628 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms