RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TBC1D25Q3MII6 688 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 HHATQ5VTY9 493 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 EEF1DP3Q658K8 133 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 C1orf122Q6ZSJ8 110 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 Q6ZUG5 572 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 KRT26Q7Z3Y9 468 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 LURAP1LQ8IV03 231 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 DCLK2Q8N568 766 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 FAM76AQ8TAV0 307 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 KIAA1524Q8TCG1 905 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 ATP6V1E2Q96A05 226 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 CFAP36Q96G28 342 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 FAM161BQ96MY7 647 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 SLC6A18Q96N87 628 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 IPO9Q96P70 1041 aaKnown RBP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 SH3GL1Q99961 368 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.06□□□□□ -1.65e-6■□□□□ 8.9
NIPBL-206ENST00000509429 CCDC113Q9H0I3 377 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 ATP8A2Q9NTI2 1148 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 MRGBPQ9NV56 204 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 SNTG2Q9NY99 539 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 HERC5Q9UII4 1024 aaKnown RBP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 PRXQ9BXM0 1461 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 RAPGEF2Q9Y4G8 1499 aa5.06□□□□□ -1.6
NIPBL-206ENST00000509429 RRBP1Q9P2E9 1410 aaKnown RBP5.06□□□□□ -1.6
NIPBL-206ENST00000509429 FAM221BA6H8Z2 402 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 KLHL41O60662 606 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 AGR2O95994 175 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 FUCA1P04066 466 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 CD3EP07766 207 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 HSPA1AP0DMV8 641 aaKnown RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 HSPA1BP0DMV9 641 aaKnown RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 KRT10P13645 584 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 KRT13P13646 458 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 TYRP1P17643 537 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 HIBADHP31937 336 aaKnown RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 HSPA1LP34931 641 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 MRPS35P82673 323 aaKnown RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 FMR1Q06787 632 aaKnown RBP eCLIP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 MPP2Q14168 576 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 TKFCQ3LXA3 575 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 CCDC152Q4G0S7 254 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 RSRC2Q7L4I2 434 aaKnown RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 DGKHQ86XP1 1220 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 DZIP1Q86YF9 867 aaKnown RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 RTKN2Q8IZC4 609 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 ZNF808Q8N4W9 903 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 LILRB1Q8NHL6 650 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-206ENST00000509429 SPATA3Q8NHX4 192 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 CCDC26Q8TAB7 109 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 SEC14L1Q92503 715 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 WASF1Q92558 559 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 CAPS2Q9BXY5 557 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 CCDC68Q9H2F9 335 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 TAOK3Q9H2K8 898 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 DGKBQ9Y6T7 804 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 ARAP1Q96P48 1450 aa5.05□□□□□ -1.6
NIPBL-206ENST00000509429 ESYT3A0FGR9 886 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 AKR1B15C9JRZ8 316 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 DYNC1I1O14576 645 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 STAM2O75886 525 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 KLHL18O94889 574 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 SMC2O95347 1197 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 APBB3O95704 486 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 PF4P02776 101 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 HOXB6P17509 224 aaKnown RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 SERPINB3P29508 390 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 GJA4P35212 333 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 MRE11P49959 708 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 NEK3P51956 506 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 KIF11P52732 1056 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 APBA1Q02410 837 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 CLPPQ16740 277 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 KIAA0753Q2KHM9 967 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 BOLA3Q53S33 107 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 RRP12Q5JTH9 1297 aaKnown RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 NOL9Q5SY16 702 aaKnown RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 IL31Q6EBC2 164 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 BTN2A1Q7KYR7 527 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 RUFY3Q7L099 469 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 SLC44A2Q8IWA5 706 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 SLC7A5P1Q8MH63 180 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 KRT222Q8N1A0 295 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 TEKT4Q8WW24 435 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 LRRC45Q96CN5 670 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 ATG4CQ96DT6 458 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 TSGA13Q96PP4 275 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 TMEM209Q96SK2 561 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 YIPF4Q9BSR8 244 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 CRACR2AQ9BSW2 395 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 DNAI2Q9GZS0 605 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 MRS2Q9HD23 443 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 TCP11L1Q9NUJ3 509 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms