RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 BSNDQ8WZ55 320 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 ELMO3Q96BJ8 720 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 ZNF653Q96CK0 615 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 PAGR1Q9BTK6 254 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 TXLNGYQ9BZA5 131 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 FAM114A2Q9NRY5 505 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
SEC31A-228ENST00000509142 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
SEC31A-228ENST00000509142 TNNI1P19237 187 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 ACTR2P61160 394 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 STRN3Q13033 797 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 ICE2Q659A1 982 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 SEMA4DQ92854 862 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 KREMEN1Q96MU8 473 aa11.78□□□□□ -0.52
SEC31A-228ENST00000509142 POLR3FQ9H1D9 316 aaPredicted RBP11.78□□□□□ -0.52
SEC31A-228ENST00000509142 MEFVO15553 781 aaPredicted RBP11.77□□□□□ -0.52
SEC31A-228ENST00000509142 MMEP08473 750 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 HNRNPH1P31943 449 aaKnown RBP11.77□□□□□ -0.52
SEC31A-228ENST00000509142 DR1Q01658 176 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 ODF2Q5BJF6 829 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 CPNE8Q86YQ8 564 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 FAM71AQ8IYT1 594 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 EIF1ADQ8N9N8 165 aaKnown RBP11.77□□□□□ -0.52
SEC31A-228ENST00000509142 FAM107BQ9H098 131 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.52
SEC31A-228ENST00000509142 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.52
SEC31A-228ENST00000509142 RGS17Q9UGC6 210 aaPredicted RBP11.77□□□□□ -0.52
SEC31A-228ENST00000509142 MYZAPP0CAP1 466 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 BIRC3Q13489 604 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 WDR44Q5JSH3 913 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 LRIG3Q6UXM1 1119 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 CYFIP1Q7L576 1253 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 APOBEC3FQ8IUX4 373 aaKnown RBP11.77□□□□□ -0.53
SEC31A-228ENST00000509142 ANKRD35Q8N283 1001 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 GLG1Q92896 1179 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 CYP26B1Q9NR63 512 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 RASAL2Q9UJF2 1139 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 H0YCG3 227 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 SHBGP04278 402 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 GZMAP12544 262 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 KCNA2P16389 499 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 MARCKSL1P49006 195 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 OAZ1P54368 228 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 MTMR3Q13615 1198 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 SV2AQ7L0J3 742 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 CCDC60Q8IWA6 550 aaPredicted RBP11.77□□□□□ -0.53
SEC31A-228ENST00000509142 TMC2Q8TDI7 906 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
SEC31A-228ENST00000509142 C1orf112Q9NSG2 853 aa11.77□□□□□ -0.53
SEC31A-228ENST00000509142 COMTP21964 271 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 CYP24A1Q07973 514 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 SEPT14Q6ZU15 432 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 ZDHHC18Q9NUE0 388 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 CYP39A1Q9NYL5 469 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 ZNF214Q9UL59 606 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 SYNGAP1Q96PV0 1343 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 A6NNZ2 444 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 E7EVH7 732 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 CYP11B1P15538 503 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 DHX9Q08211 1270 aaKnown RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 STXBP2Q15833 593 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 TUBB8Q3ZCM7 444 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 LMBRD2Q68DH5 695 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 DEPTORQ8TB45 409 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 SHC3Q92529 594 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 TATDN2Q93075 761 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 SENP7Q9BQF6 1050 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 KCNG1Q9UIX4 513 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 TTC7AQ9ULT0 858 aaPredicted RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 FAM107AO95990 144 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
SEC31A-228ENST00000509142 MTUS1Q9ULD2 1270 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 CAPN7Q9Y6W3 813 aa11.76□□□□□ -0.53
SEC31A-228ENST00000509142 PMM2O15305 246 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 GPC3P51654 580 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 CNPY4Q8N129 248 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 MDM1Q8TC05 714 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 KRT35Q92764 455 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 CYFIP2Q96F07 1278 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 GGA3Q9NZ52 723 aa11.75□□□□□ -0.53
SEC31A-228ENST00000509142 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms