RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 C2CD2LO14523 706 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 SLC16A4O15374 487 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 TADA2AO75478 443 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 MAPK7Q13164 816 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 CBX2Q14781 532 aaPredicted RBP20.48■□□□□ 0.87
UBE3D-207ENST00000509102 NT5DC1Q5TFE4 455 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 EEF1DP3Q658K8 133 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 GSTCDQ8NEC7 633 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 NECTIN4Q96NY8 510 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 NTPCRQ9BSD7 190 aaKnown RBP20.48■□□□□ 0.87
UBE3D-207ENST00000509102 VN1R3Q9BXE9 311 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 CCDC39Q9UFE4 941 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 ADAM28Q9UKQ2 775 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 ODF2LQ9ULJ1 636 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 USP20Q9Y2K6 914 aa20.48■□□□□ 0.87
UBE3D-207ENST00000509102 PI4K2BG5E9Z4 385 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 STX6O43752 255 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 ADH1AP07327 375 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 PDIA4P13667 645 aaKnown RBP20.47■□□□□ 0.87
UBE3D-207ENST00000509102 SCP2P22307 547 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 CREMQ03060 361 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 RESTQ13127 1097 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 DHX8Q14562 1220 aaKnown RBP20.47■□□□□ 0.87
UBE3D-207ENST00000509102 HSP90AA2PQ14568 343 aaPredicted RBP20.47■□□□□ 0.87
UBE3D-207ENST00000509102 SYCE2Q6PIF2 218 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 GPBP1Q86WP2 473 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 SNX21Q969T3 373 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 RIPOR3Q96MK2 946 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 ACO2Q99798 780 aaKnown RBP20.47■□□□□ 0.87
UBE3D-207ENST00000509102 APOL5Q9BWW9 433 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 EPHX3Q9H6B9 360 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 CLIC4Q9Y696 253 aa20.47■□□□□ 0.87
UBE3D-207ENST00000509102 SF3B1O75533 1304 aaKnown RBP eCLIP20.47■□□□□ 0.873e-6■■■■■ 124.8
UBE3D-207ENST00000509102 DCXO43602 365 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 FAM13AO94988 1023 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 EDN1P05305 212 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 PLCG1P19174 1290 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 KARSQ15046 597 aaKnown RBP20.46■□□□□ 0.87
UBE3D-207ENST00000509102 USP41Q3LFD5 358 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 TMEM31Q5JXX7 168 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 FUT10Q6P4F1 479 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 SUSD6Q92537 303 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 KLHL5Q96PQ7 755 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 TARS2Q9BW92 718 aaKnown RBP20.46■□□□□ 0.87
UBE3D-207ENST00000509102 CCSER1Q9C0I3 900 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 S1PR5Q9H228 398 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 ADAM7Q9H2U9 754 aa20.46■□□□□ 0.87
UBE3D-207ENST00000509102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.46■□□□□ 0.87
UBE3D-207ENST00000509102 CASTOR2A6NHX0 329 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 TBCAO75347 108 aaKnown RBP20.45■□□□□ 0.86
UBE3D-207ENST00000509102 CNPP09543 421 aaKnown RBP20.45■□□□□ 0.86
UBE3D-207ENST00000509102 MCF2P10911 925 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 MARCKSP29966 332 aaPredicted RBP20.45■□□□□ 0.86
UBE3D-207ENST00000509102 ABCD1P33897 745 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 GRM5P41594 1212 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 MTHFRP42898 656 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 CEBPZQ03701 1054 aaKnown RBP20.45■□□□□ 0.86
UBE3D-207ENST00000509102 ELAVL2Q12926 359 aaKnown RBP20.45■□□□□ 0.86
UBE3D-207ENST00000509102 MPZL3Q6UWV2 235 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 LARP4BQ92615 738 aaKnown RBP20.45■□□□□ 0.86
UBE3D-207ENST00000509102 RAD54LQ92698 747 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 BICD1Q96G01 975 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 RPGRIP1Q96KN7 1286 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 CDT1Q9H211 546 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 MTMR6Q9Y217 621 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 NR2E1Q9Y466 385 aa20.45■□□□□ 0.86
UBE3D-207ENST00000509102 PTGESO14684 152 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 TOM1L1O75674 476 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 EPCAMP16422 314 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 MATR3P43243 847 aaKnown RBP eCLIP20.44■□□□□ 0.862e-7■■■■■ 26.8
UBE3D-207ENST00000509102 DSG1Q02413 1049 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 ATAT1Q5SQI0 421 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 RARS2Q5T160 578 aaKnown RBP20.44■□□□□ 0.86
UBE3D-207ENST00000509102 ZBTB33Q86T24 672 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 GPR65Q8IYL9 337 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 MYCT1Q8N699 235 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 TMEM161BQ8NDZ6 487 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 SLC22A17Q8WUG5 538 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 FBXL18Q96ME1 805 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 ACAP3Q96P50 834 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 REEP2Q9BRK0 252 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 ZHX3Q9H4I2 956 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 SFXN1Q9H9B4 322 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 PARVGQ9HBI0 331 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 SLC38A7Q9NVC3 462 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 ANKFY1Q9P2R3 1169 aa20.44■□□□□ 0.86
UBE3D-207ENST00000509102 SRPRBQ9Y5M8 271 aaKnown RBP20.44■□□□□ 0.86
UBE3D-207ENST00000509102 LOC730098B7Z3J9 87 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 LILRB3O75022 631 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 GLUD1P00367 558 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 MAPTP10636 758 aaKnown RBP20.43■□□□□ 0.86
UBE3D-207ENST00000509102 HARSP12081 509 aaKnown RBP20.43■□□□□ 0.86
UBE3D-207ENST00000509102 CLCN4P51793 760 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 OSTNP61366 133 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 GRIN1Q05586 938 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 MCM6Q14566 821 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 PTPAQ15257 358 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 ZPBP2Q6X784 338 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 TAS1R3Q7RTX0 852 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 TAS1R1Q7RTX1 841 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms