RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SLC6A9P48067 706 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 ITKQ08881 620 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 KLF10Q13118 480 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 CLUL1Q15846 466 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 PGM2L1Q6PCE3 622 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 DRICH1Q6PGQ1 229 aaPredicted RBP6.82□□□□□ -1.32
DHFR-204ENST00000508282 USP51Q70EK9 711 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 PQLC1Q8N2U9 271 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 CPT1CQ8TCG5 803 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 ZNF483Q8TF39 744 aaPredicted RBP6.82□□□□□ -1.32
DHFR-204ENST00000508282 SRRDQ9UH36 339 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 CLCA2Q9UQC9 943 aa6.82□□□□□ -1.32
DHFR-204ENST00000508282 CXorf49A8MYA2 514 aaPredicted RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 AHRRA9YTQ3 701 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 FZD9O00144 591 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 CYR61O00622 381 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 GABRDO14764 452 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 TRIM24O15164 1050 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCDHGA12O60330 932 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 SCAF4O95104 1147 aaKnown RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 RBP3P10745 1247 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 NR4A1P22736 598 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 GUCY1A2P33402 732 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 ABHD18Q0P651 414 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 ZNF276Q8N554 614 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 PPM1NQ8N819 430 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 RNF169Q8NCN4 708 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 OR10H5Q8NGA6 315 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 SLC25A43Q8WUT9 341 aaPredicted RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 JADE3Q92613 823 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 TFAP2CQ92754 450 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 MTMR8Q96EF0 704 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 FAXDC2Q96IV6 333 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 UHRF1Q96T88 793 aaPredicted RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCED1AQ9H1Q7 454 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 LDAHQ9H6V9 325 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 MKS1Q9NXB0 559 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 EIF2B4Q9UI10 523 aaKnown RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 ING1Q9UK53 422 aaPredicted RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 DNM3Q9UQ16 869 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCDHGA9Q9Y5G4 932 aaKnown RBP6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCDHGA8Q9Y5G5 932 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCDHGA7Q9Y5G6 932 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCDHGA6Q9Y5G7 932 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 PCDHGA3Q9Y5H0 932 aa6.81□□□□□ -1.32
DHFR-204ENST00000508282 RPS6KA4O75676 772 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 MYBL2P10244 700 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 MCM7P33993 719 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 PER3P56645 1201 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 SP140Q13342 867 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 EFCAB12Q6NXP0 572 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.8□□□□□ -1.321e-9■■□□□ 13.5
DHFR-204ENST00000508282 STON2Q8WXE9 905 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 SSH1Q8WYL5 1049 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 ZNF768Q9H5H4 540 aaKnown RBP6.8□□□□□ -1.32
DHFR-204ENST00000508282 LANCL2Q9NS86 450 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 TUBD1Q9UJT1 453 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 REXO2Q9Y3B8 237 aaKnown RBP6.8□□□□□ -1.32
DHFR-204ENST00000508282 CHST2Q9Y4C5 530 aa6.8□□□□□ -1.32
DHFR-204ENST00000508282 PNPLA7Q6ZV29 1317 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 ALG1L2C9J202 215 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 PJA2O43164 708 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 RECQL4O94761 1208 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 ENDOD1O94919 500 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
DHFR-204ENST00000508282 CLRN1P58418 232 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 NHLH2Q02577 135 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 AFMIDQ63HM1 303 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 NRG4Q8WWG1 115 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 DPF2Q92785 391 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 SORCS2Q96PQ0 1159 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 SENP6Q9GZR1 1112 aaPredicted RBP6.79□□□□□ -1.32
DHFR-204ENST00000508282 NRDE2Q9H7Z3 1164 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 POGKQ9P215 609 aa6.79□□□□□ -1.32
DHFR-204ENST00000508282 AJAP1Q9UKB5 411 aaPredicted RBP6.79□□□□□ -1.32
DHFR-204ENST00000508282 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 FAM171A2A8MVW0 826 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 NDUFS2O75306 463 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 MAKP20794 623 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 FPR1P21462 350 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 C5AR1P21730 350 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 MGAT1P26572 445 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 FAM189BP81408 668 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 ACAP2Q15057 778 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 PCBP2Q15366 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
DHFR-204ENST00000508282 RHOUQ7L0Q8 258 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 ZFP28Q8NHY6 868 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 CLIP3Q96DZ5 547 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 FUBP3Q96I24 572 aaKnown RBP eCLIP6.78□□□□□ -1.32
DHFR-204ENST00000508282 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
DHFR-204ENST00000508282 SHTN1A0MZ66 631 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 KLHL33A6NCF5 533 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 AMY1AP04745 511 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 SNRPA1P09661 255 aaKnown RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 IL2RBP14784 551 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 ZSCAN20P17040 1043 aaPredicted RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 PCSK1P29120 753 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 WASP42768 502 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 ALDH1A3P47895 512 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 RNASE9P60153 205 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms