RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SFPQP23246 707 aaKnown RBP eCLIP8.14□□□□□ -1.11
VCAN-207ENST00000507162 SOX9P48436 509 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 ELF2Q15723 593 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 FAM78AQ5JUQ0 283 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 DGKKQ5KSL6 1271 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 AXDND1Q5T1B0 1012 aaPredicted RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 CATSPER4Q7RTX7 472 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 CEP57Q86XR8 500 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 MAP4K3Q8IVH8 894 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 RNF168Q8IYW5 571 aaPredicted RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 SPRYD3Q8NCJ5 442 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 TTC8Q8TAM2 541 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 MDM1Q8TC05 714 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 CSGALNACT1Q8TDX6 532 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 RABGGTAQ92696 567 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 RRP36Q96EU6 259 aaKnown RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 ZC3H10Q96K80 434 aaKnown RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 MBOAT7Q96N66 472 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 FDXACB1Q9BRP7 624 aaPredicted RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 TRAIPQ9BWF2 469 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 APOL6Q9BWW8 343 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 DUSP15Q9H1R2 295 aaPredicted RBP8.14□□□□□ -1.11
VCAN-207ENST00000507162 DDX19BQ9UMR2 479 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 SLC8A2Q9UPR5 921 aa8.14□□□□□ -1.11
VCAN-207ENST00000507162 SHROOM3Q8TF72 1996 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 BCLAF3A2AJT9 711 aaKnown RBP8.13□□□□□ -1.11
VCAN-207ENST00000507162 PATE3B3GLJ2 98 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 H0Y626 953 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 J3QKU1 62 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 NRG2O14511 850 aaPredicted RBP8.13□□□□□ -1.11
VCAN-207ENST00000507162 TADA2AO75478 443 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 C1QL1O75973 258 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 TRIM16O95361 564 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 RHOP08100 348 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 PSMC3P17980 439 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 GBP1P32455 592 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 ZNF76P36508 570 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 VIPR2P41587 438 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 IRX4P78413 519 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 CREMQ03060 361 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 SLC5A9Q2M3M2 681 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 FUT10Q6P4F1 479 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 MRPL10Q7Z7H8 261 aaKnown RBP8.13□□□□□ -1.11
VCAN-207ENST00000507162 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 ABCA7Q8IZY2 2146 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 LINC01465Q8N7H1 131 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 EVI5LQ96CN4 794 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 CRELD1Q96HD1 420 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 UBL7Q96S82 380 aaPredicted RBP8.13□□□□□ -1.11
VCAN-207ENST00000507162 CLSTN3Q9BQT9 956 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 KRT23Q9C075 422 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 INO80BQ9C086 356 aaPredicted RBP8.13□□□□□ -1.11
VCAN-207ENST00000507162 NRBP2Q9NSY0 501 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 GABBR1Q9UBS5 961 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 SEC63Q9UGP8 760 aaKnown RBP8.13□□□□□ -1.11
VCAN-207ENST00000507162 TCEAL9Q9UHQ7 104 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 INVSQ9Y283 1065 aa8.13□□□□□ -1.11
VCAN-207ENST00000507162 TEX15Q9BXT5 2789 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 ATG2BQ96BY7 2078 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 ZMYM6O95789 1325 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 TEP1Q99973 2627 aaKnown RBP8.12□□□□□ -1.11
VCAN-207ENST00000507162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
VCAN-207ENST00000507162 FAM221BA6H8Z2 402 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 SLC38A8A6NNN8 435 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 MAP3K13O43283 966 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 EFEMP2O95967 443 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 MS4A1P11836 297 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 ITGA4P13612 1032 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 FCARP24071 287 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 HOXA9P31269 272 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 MAPK8P45983 427 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 NMIQ13287 307 aaPredicted RBP8.12□□□□□ -1.11
VCAN-207ENST00000507162 PON2Q15165 354 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 SEC23AQ15436 765 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 CEP55Q53EZ4 464 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 WDR44Q5JSH3 913 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 RTP2Q5QGT7 225 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 VITQ6UXI7 678 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 CYB5R4Q7L1T6 521 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 YAF2Q8IY57 180 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 TCEAL4Q96EI5 215 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 GAD1Q99259 594 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 TRPV5Q9NQA5 729 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 POLR3BQ9NW08 1133 aaPredicted RBP8.12□□□□□ -1.11
VCAN-207ENST00000507162 MIOSQ9NXC5 875 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 MAFBQ9Y5Q3 323 aaPredicted RBP8.12□□□□□ -1.11
VCAN-207ENST00000507162 GOLGA4Q13439 2230 aaKnown RBP8.12□□□□□ -1.11
VCAN-207ENST00000507162 NOTCH4Q99466 2003 aa8.12□□□□□ -1.11
VCAN-207ENST00000507162 PTPN13Q12923 2485 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 CNTNAP2Q9UHC6 1331 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 ARL5CA6NH57 179 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 TK2O00142 265 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 MEFVO15553 781 aaPredicted RBP8.11□□□□□ -1.11
VCAN-207ENST00000507162 ADAM12O43184 909 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 AKAP3O75969 853 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms